Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNA5SP345-201ENST00000410646 108 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 AC019050.1-201ENST00000418508 492 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.82□□□□□ -1.48
GABPAQ06546 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.82□□□□□ -1.48
GABPAQ06546 CEACAMP9-201ENST00000442990 513 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.82□□□□□ -1.48
GABPAQ06546 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.82□□□□□ -1.48
GABPAQ06546 OR2A3P-201ENST00000493774 953 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.82□□□□□ -1.48
GABPAQ06546 AC093815.1-201ENST00000508637 280 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 MTCO3P42-201ENST00000509488 518 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 MTCO3P39-201ENST00000514812 518 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.82□□□□□ -1.48
GABPAQ06546 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 CR383656.6-201ENST00000550518 394 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.82□□□□□ -1.48
GABPAQ06546 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.82□□□□□ -1.48
GABPAQ06546 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.82□□□□□ -1.48
GABPAQ06546 AL512782.1-201ENST00000603093 364 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 AL133406.3-201ENST00000606817 541 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.82□□□□□ -1.48
GABPAQ06546 AL161616.1-201ENST00000611867 286 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 AC022960.2-201ENST00000616300 666 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.82□□□□□ -1.48
GABPAQ06546 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.82□□□□□ -1.48
GABPAQ06546 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
GABPAQ06546 NLRP3P1-201ENST00000622303 1785 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.82□□□□□ -1.48
GABPAQ06546 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 CASC19-260ENST00000641828 2001 ntBASIC5.82□□□□□ -1.48
GABPAQ06546 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.82□□□□□ -1.48
GABPAQ06546 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
GABPAQ06546 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
GABPAQ06546 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.81□□□□□ -1.48
GABPAQ06546 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
GABPAQ06546 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GABPAQ06546 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.81□□□□□ -1.48
GABPAQ06546 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GABPAQ06546 AC013442.1-201ENST00000397347 228 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 AL357515.1-201ENST00000402967 542 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.81□□□□□ -1.48
GABPAQ06546 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.81□□□□□ -1.48
GABPAQ06546 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.81□□□□□ -1.48
GABPAQ06546 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.81□□□□□ -1.48
GABPAQ06546 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.81□□□□□ -1.48
GABPAQ06546 AL359265.2-201ENST00000434367 631 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 AL138878.2-201ENST00000440581 1241 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.81□□□□□ -1.48
GABPAQ06546 SLC25A18P1-201ENST00000449385 454 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 AC011005.3-201ENST00000491624 395 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 SCARNA22-201ENST00000503991 125 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 AC026688.1-201ENST00000520639 1168 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.81□□□□□ -1.48
GABPAQ06546 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.81□□□□□ -1.48
GABPAQ06546 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.81□□□□□ -1.48
GABPAQ06546 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.81□□□□□ -1.48
GABPAQ06546 AC116553.2-201ENST00000564203 463 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.81□□□□□ -1.48
GABPAQ06546 AC234771.5-201ENST00000600161 514 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 AC104687.2-201ENST00000604442 342 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 AC007497.1-201ENST00000610421 561 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GABPAQ06546 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GABPAQ06546 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GABPAQ06546 AC091932.2-201ENST00000623014 291 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
GABPAQ06546 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GABPAQ06546 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GABPAQ06546 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
GABPAQ06546 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
GABPAQ06546 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.81□□□□□ -1.48
GABPAQ06546 AP000432.2-201ENST00000624164 2048 ntBASIC5.81□□□□□ -1.48
GABPAQ06546 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.8□□□□□ -1.48
GABPAQ06546 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GABPAQ06546 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
GABPAQ06546 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
GABPAQ06546 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
GABPAQ06546 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GABPAQ06546 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.8□□□□□ -1.48
GABPAQ06546 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.8□□□□□ -1.48
GABPAQ06546 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GABPAQ06546 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GABPAQ06546 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GABPAQ06546 TBCAP2-201ENST00000416175 326 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 AL807761.1-201ENST00000417622 171 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 AL645608.4-201ENST00000423619 154 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.8□□□□□ -1.48
GABPAQ06546 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.8□□□□□ -1.48
GABPAQ06546 RPL5P16-201ENST00000471467 790 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 AC116562.1-201ENST00000485355 781 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 AC008897.1-201ENST00000494006 347 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GABPAQ06546 AC097486.1-201ENST00000515331 210 ntBASIC5.8□□□□□ -1.48
GABPAQ06546 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms