Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP1Q04837 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP1Q04837 AC015864.1-201ENST00000496512 544 ntBASIC4.09□□□□□ -1.75
SSBP1Q04837 AC025445.1-201ENST00000502728 300 ntBASIC4.09□□□□□ -1.75
SSBP1Q04837 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP1Q04837 RN7SKP260-201ENST00000516907 149 ntBASIC4.09□□□□□ -1.75
SSBP1Q04837 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP1Q04837 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP1Q04837 AC069240.1-201ENST00000548774 375 ntBASIC4.09□□□□□ -1.75
SSBP1Q04837 AC015912.2-201ENST00000571053 181 ntBASIC4.09□□□□□ -1.75
SSBP1Q04837 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP1Q04837 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP1Q04837 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP1Q04837 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP1Q04837 AC209154.1-201ENST00000582156 337 ntBASIC4.09□□□□□ -1.75
SSBP1Q04837 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP1Q04837 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP1Q04837 AC005377.1-201ENST00000605126 456 ntBASIC4.09□□□□□ -1.75
SSBP1Q04837 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP1Q04837 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP1Q04837 AC087821.1-201ENST00000623639 567 ntBASIC4.09□□□□□ -1.75
SSBP1Q04837 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.09□□□□□ -1.75
SSBP1Q04837 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP1Q04837 Z98755.1-201ENST00000407015 1384 ntBASIC4.09□□□□□ -1.75
SSBP1Q04837 MTCO1P7-201ENST00000419523 1542 ntBASIC4.09□□□□□ -1.75
SSBP1Q04837 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP1Q04837 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SSBP1Q04837 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.08□□□□□ -1.76
SSBP1Q04837 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
SSBP1Q04837 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 RNU4-44P-201ENST00000363050 141 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SSBP1Q04837 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.08□□□□□ -1.76
SSBP1Q04837 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 SNORA70-201ENST00000384436 135 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 AL391422.1-201ENST00000402155 436 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 ARL4AP5-201ENST00000404372 599 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP1Q04837 RNA5SP345-201ENST00000410646 108 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.08□□□□□ -1.76
SSBP1Q04837 AC004690.1-201ENST00000418216 328 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 DDX39BP1-205ENST00000422507 192 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 RPL7P57-201ENST00000423238 740 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 SUMO2P3-201ENST00000438311 288 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 AL390119.1-201ENST00000440329 312 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 AC000111.2-201ENST00000448200 210 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
SSBP1Q04837 AC044810.1-201ENST00000480271 711 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 RN7SL97P-201ENST00000486780 299 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP1Q04837 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP1Q04837 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 AC126177.5-201ENST00000549599 178 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.08□□□□□ -1.76
SSBP1Q04837 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.08□□□□□ -1.76
SSBP1Q04837 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP1Q04837 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.08□□□□□ -1.76
SSBP1Q04837 AL669942.2-201ENST00000620352 697 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 AL359757.1-201ENST00000623176 255 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 AL353662.3-201ENST00000625131 237 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 TMEM30CP-203ENST00000637814 1035 ntBASIC4.08□□□□□ -1.76
SSBP1Q04837 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.08□□□□□ -1.76
SSBP1Q04837 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.08□□□□□ -1.76
SSBP1Q04837 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP1Q04837 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.07□□□□□ -1.76
SSBP1Q04837 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 KARSP1-201ENST00000451871 1752 ntBASIC4.07□□□□□ -1.76
SSBP1Q04837 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
SSBP1Q04837 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SSBP1Q04837 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 AC007382.1-201ENST00000624376 2618 ntBASIC4.07□□□□□ -1.76
SSBP1Q04837 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.07□□□□□ -1.76
SSBP1Q04837 UBTFL3-201ENST00000418934 1024 ntBASIC4.07□□□□□ -1.76
SSBP1Q04837 NPM1P25-201ENST00000429734 854 ntBASIC4.07□□□□□ -1.76
SSBP1Q04837 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.07□□□□□ -1.76
SSBP1Q04837 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.07□□□□□ -1.76
SSBP1Q04837 UBTFL6-201ENST00000477929 1024 ntBASIC4.07□□□□□ -1.76
SSBP1Q04837 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SSBP1Q04837 AK4P6-201ENST00000505168 528 ntBASIC4.07□□□□□ -1.76
SSBP1Q04837 AL671862.1-201ENST00000515851 349 ntBASIC4.07□□□□□ -1.76
SSBP1Q04837 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.07□□□□□ -1.76
SSBP1Q04837 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.07□□□□□ -1.76
SSBP1Q04837 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms