Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 HYKK-203ENST00000563233 734 ntTSL 2 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC022146.1-201ENST00000595307 847 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 AL160281.1-201ENST00000605307 311 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC015908.5-201ENST00000623289 343 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 AC009093.8-201ENST00000641769 292 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
HSPG2P98160 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC2.92□□□□□ -1.94
HSPG2P98160 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC2.92□□□□□ -1.94
HSPG2P98160 TPT1P2-201ENST00000413105 503 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 AL133547.1-201ENST00000448546 220 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 AC090804.1-201ENST00000448870 490 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 AC007967.1-201ENST00000455422 1159 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.92□□□□□ -1.94
HSPG2P98160 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 AC010460.1-201ENST00000507087 466 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC2.92□□□□□ -1.94
HSPG2P98160 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.92□□□□□ -1.94
HSPG2P98160 FAM27B-201ENST00000610601 213 ntBASIC2.92□□□□□ -1.94
HSPG2P98160 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
HSPG2P98160 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC2.92□□□□□ -1.94
HSPG2P98160 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 TLK1P1-201ENST00000456760 2440 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 MIR483-201ENST00000385070 76 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 AL590399.2-201ENST00000427536 309 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 CDY14P-201ENST00000431260 1014 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 CDY12P-201ENST00000440679 1015 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 CDY13P-201ENST00000445813 1015 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 CDY23P-201ENST00000451661 1014 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 AC091868.1-201ENST00000508746 304 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 AC136777.2-201ENST00000522979 358 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 AP001267.4-201ENST00000602598 545 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 LGI1-209ENST00000627699 664 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 AC245060.6-201ENST00000624350 8420 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC2.91□□□□□ -1.94
HSPG2P98160 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 RNU4-64P-201ENST00000410795 131 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 PDSS1P1-201ENST00000422953 1114 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 AC006326.1-201ENST00000445465 787 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 AP000827.1-201ENST00000527814 258 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 AL022401.1-201ENST00000619498 108 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC2.91□□□□□ -1.94
HSPG2P98160 AC024023.1-201ENST00000624530 922 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HSPG2P98160 AC093671.1-201ENST00000624981 2929 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 SCYL3-202ENST00000367771 6364 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 AL512590.3-202ENST00000534123 6463 ntTSL 2 BASIC2.91□□□□□ -1.94
HSPG2P98160 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HSPG2P98160 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
HSPG2P98160 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 AC092647.1-201ENST00000420654 287 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 AC007389.2-201ENST00000434630 306 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC2.91□□□□□ -1.94
HSPG2P98160 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 AP001160.4-201ENST00000596971 382 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 AC012409.3-201ENST00000611343 981 ntBASIC2.91□□□□□ -1.94
HSPG2P98160 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC2.91□□□□□ -1.94
HSPG2P98160 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms