Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKDCP78527 FAM27B-201ENST00000610601 213 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRKDCP78527 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRKDCP78527 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRKDCP78527 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKDCP78527 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRKDCP78527 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PRKDCP78527 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PRKDCP78527 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PRKDCP78527 ZNF812P-201ENST00000457674 1694 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 MIR183-201ENST00000384958 110 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.38□□□□□ -1.87
PRKDCP78527 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKDCP78527 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKDCP78527 AP000907.1-201ENST00000428428 510 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 RPL19P16-201ENST00000433839 588 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 RPL21P89-201ENST00000444021 467 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKDCP78527 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKDCP78527 RPS27AP13-201ENST00000498403 237 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 RPL23AP94-201ENST00000512518 302 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.38□□□□□ -1.87
PRKDCP78527 AL442067.2-201ENST00000614033 363 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PRKDCP78527 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC3.38□□□□□ -1.87
PRKDCP78527 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PRKDCP78527 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PRKDCP78527 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC3.38□□□□□ -1.87
PRKDCP78527 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC3.38□□□□□ -1.87
PRKDCP78527 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC3.38□□□□□ -1.87
PRKDCP78527 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRKDCP78527 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PRKDCP78527 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PRKDCP78527 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC3.38□□□□□ -1.87
PRKDCP78527 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKDCP78527 AC105137.1-201ENST00000484355 562 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 RPL7P41-201ENST00000485823 957 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC3.38□□□□□ -1.87
PRKDCP78527 AC005000.2-201ENST00000605468 310 ntBASIC3.38□□□□□ -1.87
PRKDCP78527 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PRKDCP78527 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
PRKDCP78527 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC3.37□□□□□ -1.87
PRKDCP78527 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKDCP78527 AC010460.1-201ENST00000507087 466 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.37□□□□□ -1.87
PRKDCP78527 AP003730.1-201ENST00000524605 285 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 SOCS5P3-201ENST00000425115 1576 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 PIEZO2-201ENST00000302079 9356 ntTSL 5 BASIC3.37□□□□□ -1.87
PRKDCP78527 ZNF833P-201ENST00000424938 1494 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PRKDCP78527 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PRKDCP78527 ABCF2P2-201ENST00000450549 296 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKDCP78527 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 MIMT1-201ENST00000597105 1050 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 AC112230.1-201ENST00000604342 547 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 MIR3653-201ENST00000625572 110 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 LARP1BP1-201ENST00000506036 1359 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PRKDCP78527 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKDCP78527 AL450023.3-201ENST00000440592 271 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKDCP78527 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKDCP78527 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.37□□□□□ -1.87
PRKDCP78527 snoU109.5-201ENST00000516231 132 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.37□□□□□ -1.87
PRKDCP78527 AL137843.1-201ENST00000605078 385 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 ZNF137P-201ENST00000456718 1920 ntBASIC3.37□□□□□ -1.87
PRKDCP78527 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
PRKDCP78527 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRKDCP78527 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PRKDCP78527 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PRKDCP78527 SSBP2-201ENST00000320672 8780 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 156.8 ms