Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 MTCO1P15-201ENST00000529569 1526 ntBASIC5.52□□□□□ -1.53
TPM4P67936 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TPM4P67936 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TPM4P67936 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TPM4P67936 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.51□□□□□ -1.53
TPM4P67936 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TPM4P67936 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM4P67936 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM4P67936 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM4P67936 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM4P67936 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.51□□□□□ -1.53
TPM4P67936 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM4P67936 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM4P67936 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM4P67936 AC012075.1-201ENST00000436549 580 ntBASIC5.51□□□□□ -1.53
TPM4P67936 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.51□□□□□ -1.53
TPM4P67936 CYCSP12-201ENST00000437729 300 ntBASIC5.51□□□□□ -1.53
TPM4P67936 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM4P67936 RPS17P2-201ENST00000461663 408 ntBASIC5.51□□□□□ -1.53
TPM4P67936 AC007998.1-201ENST00000474156 672 ntBASIC5.51□□□□□ -1.53
TPM4P67936 AC015864.1-201ENST00000496512 544 ntBASIC5.51□□□□□ -1.53
TPM4P67936 PSMA2P2-201ENST00000504319 686 ntBASIC5.51□□□□□ -1.53
TPM4P67936 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.51□□□□□ -1.53
TPM4P67936 AC024940.3-201ENST00000538551 316 ntBASIC5.51□□□□□ -1.53
TPM4P67936 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.51□□□□□ -1.53
TPM4P67936 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM4P67936 RN7SL176P-201ENST00000580352 264 ntBASIC5.51□□□□□ -1.53
TPM4P67936 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM4P67936 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.51□□□□□ -1.53
TPM4P67936 AC234782.5-201ENST00000617723 324 ntBASIC5.51□□□□□ -1.53
TPM4P67936 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.51□□□□□ -1.53
TPM4P67936 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TPM4P67936 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TPM4P67936 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM4P67936 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TPM4P67936 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.51□□□□□ -1.53
TPM4P67936 SSXP3-201ENST00000442971 1300 ntBASIC5.5□□□□□ -1.53
TPM4P67936 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.5□□□□□ -1.53
TPM4P67936 NAMPTP1-201ENST00000440465 2514 ntBASIC5.5□□□□□ -1.53
TPM4P67936 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TPM4P67936 AL672167.1-205ENST00000641112 3080 ntBASIC5.5□□□□□ -1.53
TPM4P67936 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
TPM4P67936 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TPM4P67936 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TPM4P67936 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
TPM4P67936 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TPM4P67936 IL6STP1-201ENST00000346911 1020 ntBASIC5.5□□□□□ -1.53
TPM4P67936 RNA5SP510-201ENST00000364697 99 ntBASIC5.5□□□□□ -1.53
TPM4P67936 ATP5HP3-201ENST00000396994 486 ntBASIC5.5□□□□□ -1.53
TPM4P67936 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM4P67936 E2F6P2-201ENST00000420708 748 ntBASIC5.5□□□□□ -1.53
TPM4P67936 RGS17P1-201ENST00000423358 553 ntBASIC5.5□□□□□ -1.53
TPM4P67936 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
TPM4P67936 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.5□□□□□ -1.53
TPM4P67936 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.5□□□□□ -1.53
TPM4P67936 YWHAEP1-201ENST00000453697 763 ntBASIC5.5□□□□□ -1.53
TPM4P67936 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM4P67936 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.5□□□□□ -1.53
TPM4P67936 RPS21P4-201ENST00000487122 248 ntBASIC5.5□□□□□ -1.53
TPM4P67936 RN7SL558P-201ENST00000497468 299 ntBASIC5.5□□□□□ -1.53
TPM4P67936 AC010350.1-201ENST00000504908 231 ntBASIC5.5□□□□□ -1.53
TPM4P67936 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.5□□□□□ -1.53
TPM4P67936 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.5□□□□□ -1.53
TPM4P67936 AC134349.2-201ENST00000535136 910 ntBASIC5.5□□□□□ -1.53
TPM4P67936 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TPM4P67936 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TPM4P67936 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.5□□□□□ -1.53
TPM4P67936 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.5□□□□□ -1.53
TPM4P67936 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM4P67936 AC126177.5-201ENST00000549599 178 ntBASIC5.5□□□□□ -1.53
TPM4P67936 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.5□□□□□ -1.53
TPM4P67936 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.5□□□□□ -1.53
TPM4P67936 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.5□□□□□ -1.53
TPM4P67936 AC074140.1-201ENST00000621617 208 ntBASIC5.5□□□□□ -1.53
TPM4P67936 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.5□□□□□ -1.53
TPM4P67936 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.5□□□□□ -1.53
TPM4P67936 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TPM4P67936 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TPM4P67936 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TPM4P67936 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TPM4P67936 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TPM4P67936 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.5□□□□□ -1.53
TPM4P67936 ECM1P2-201ENST00000503354 1577 ntBASIC5.5□□□□□ -1.53
TPM4P67936 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TPM4P67936 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TPM4P67936 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TPM4P67936 RNU1-94P-201ENST00000362627 173 ntBASIC5.49□□□□□ -1.53
TPM4P67936 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.49□□□□□ -1.53
TPM4P67936 AL391422.1-201ENST00000402155 436 ntBASIC5.49□□□□□ -1.53
TPM4P67936 RN7SKP114-201ENST00000410327 279 ntBASIC5.49□□□□□ -1.53
TPM4P67936 BX323845.1-201ENST00000432417 179 ntBASIC5.49□□□□□ -1.53
TPM4P67936 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.49□□□□□ -1.53
TPM4P67936 AC004938.1-201ENST00000438468 308 ntBASIC5.49□□□□□ -1.53
TPM4P67936 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.49□□□□□ -1.53
TPM4P67936 ARAFP2-201ENST00000440565 559 ntBASIC5.49□□□□□ -1.53
TPM4P67936 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.49□□□□□ -1.53
TPM4P67936 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.49□□□□□ -1.53
TPM4P67936 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.49□□□□□ -1.53
TPM4P67936 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.49□□□□□ -1.53
TPM4P67936 RN7SL168P-201ENST00000463821 279 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms