Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC022884.2-201ENST00000578535 580 ntBASIC4.86□□□□□ -1.63
VSX2P58304 AC105254.2-201ENST00000603636 436 ntBASIC4.86□□□□□ -1.63
VSX2P58304 AP005432.2-201ENST00000608162 586 ntBASIC4.86□□□□□ -1.63
VSX2P58304 AL451049.1-201ENST00000608672 497 ntBASIC4.86□□□□□ -1.63
VSX2P58304 BNIP3P41-202ENST00000616656 861 ntBASIC4.86□□□□□ -1.63
VSX2P58304 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VSX2P58304 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.86□□□□□ -1.63
VSX2P58304 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.86□□□□□ -1.63
VSX2P58304 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VSX2P58304 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VSX2P58304 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VSX2P58304 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VSX2P58304 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VSX2P58304 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.85□□□□□ -1.63
VSX2P58304 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
VSX2P58304 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.85□□□□□ -1.63
VSX2P58304 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.85□□□□□ -1.63
VSX2P58304 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.85□□□□□ -1.63
VSX2P58304 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
VSX2P58304 AC104260.2-201ENST00000623551 3497 ntBASIC4.85□□□□□ -1.63
VSX2P58304 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VSX2P58304 AL035079.1-201ENST00000405210 287 ntBASIC4.85□□□□□ -1.63
VSX2P58304 NPM1P40-201ENST00000412758 733 ntBASIC4.85□□□□□ -1.63
VSX2P58304 RPL12P9-201ENST00000412942 488 ntBASIC4.85□□□□□ -1.63
VSX2P58304 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.85□□□□□ -1.63
VSX2P58304 PSMD10P3-201ENST00000437000 448 ntBASIC4.85□□□□□ -1.63
VSX2P58304 AC012512.1-201ENST00000446594 718 ntBASIC4.85□□□□□ -1.63
VSX2P58304 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.85□□□□□ -1.63
VSX2P58304 RN7SL826P-201ENST00000479724 288 ntBASIC4.85□□□□□ -1.63
VSX2P58304 RN7SL97P-201ENST00000486780 299 ntBASIC4.85□□□□□ -1.63
VSX2P58304 AC231760.1-201ENST00000498002 260 ntBASIC4.85□□□□□ -1.63
VSX2P58304 USP9YP2-201ENST00000504503 1000 ntBASIC4.85□□□□□ -1.63
VSX2P58304 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.85□□□□□ -1.63
VSX2P58304 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 COX6B1P5-201ENST00000509843 249 ntBASIC4.85□□□□□ -1.63
VSX2P58304 USP9YP1-201ENST00000513521 1002 ntBASIC4.85□□□□□ -1.63
VSX2P58304 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.85□□□□□ -1.63
VSX2P58304 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.85□□□□□ -1.63
VSX2P58304 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.85□□□□□ -1.63
VSX2P58304 OR7E128P-201ENST00000532736 1024 ntBASIC4.85□□□□□ -1.63
VSX2P58304 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 AL390334.1-201ENST00000556395 450 ntBASIC4.85□□□□□ -1.63
VSX2P58304 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.85□□□□□ -1.63
VSX2P58304 MIR4646-201ENST00000580775 63 ntBASIC4.85□□□□□ -1.63
VSX2P58304 MIR4691-201ENST00000583764 85 ntBASIC4.85□□□□□ -1.63
VSX2P58304 AL627230.1-201ENST00000613077 211 ntBASIC4.85□□□□□ -1.63
VSX2P58304 AL591926.8-201ENST00000616876 211 ntBASIC4.85□□□□□ -1.63
VSX2P58304 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.85□□□□□ -1.63
VSX2P58304 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 TCP1P3-201ENST00000414406 1498 ntBASIC4.85□□□□□ -1.63
VSX2P58304 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.85□□□□□ -1.63
VSX2P58304 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 OR4G1P-202ENST00000641173 1788 ntBASIC4.85□□□□□ -1.63
VSX2P58304 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
VSX2P58304 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.85□□□□□ -1.63
VSX2P58304 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.85□□□□□ -1.63
VSX2P58304 SMG1P7-201ENST00000565246 2704 ntBASIC4.85□□□□□ -1.63
VSX2P58304 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VSX2P58304 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.85□□□□□ -1.63
VSX2P58304 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VSX2P58304 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
VSX2P58304 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.84□□□□□ -1.63
VSX2P58304 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VSX2P58304 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
VSX2P58304 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.84□□□□□ -1.63
VSX2P58304 DDX18P6-201ENST00000450119 1997 ntBASIC4.84□□□□□ -1.63
VSX2P58304 AL731532.2-201ENST00000623542 1953 ntBASIC4.84□□□□□ -1.63
VSX2P58304 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.84□□□□□ -1.63
VSX2P58304 AC131971.1-201ENST00000332881 1482 ntBASIC4.84□□□□□ -1.63
VSX2P58304 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.84□□□□□ -1.63
VSX2P58304 AC073429.2-201ENST00000569694 1444 ntBASIC4.84□□□□□ -1.63
VSX2P58304 CASC19-221ENST00000641309 1382 ntBASIC4.84□□□□□ -1.63
VSX2P58304 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VSX2P58304 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
VSX2P58304 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VSX2P58304 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
VSX2P58304 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.84□□□□□ -1.63
VSX2P58304 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VSX2P58304 BX323845.1-201ENST00000432417 179 ntBASIC4.84□□□□□ -1.63
VSX2P58304 RHOT1P3-201ENST00000436571 331 ntBASIC4.84□□□□□ -1.63
VSX2P58304 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.84□□□□□ -1.63
VSX2P58304 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.84□□□□□ -1.63
VSX2P58304 RPL12P3-201ENST00000440080 396 ntBASIC4.84□□□□□ -1.63
VSX2P58304 SERPINA7P1-201ENST00000443077 631 ntBASIC4.84□□□□□ -1.63
VSX2P58304 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.84□□□□□ -1.63
VSX2P58304 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.84□□□□□ -1.63
VSX2P58304 OR52E3P-201ENST00000452083 936 ntBASIC4.84□□□□□ -1.63
VSX2P58304 AC245028.2-201ENST00000458673 253 ntBASIC4.84□□□□□ -1.63
VSX2P58304 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.84□□□□□ -1.63
VSX2P58304 AC135999.1-201ENST00000478962 479 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms