Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH6P55285 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.21□□□□□ -1.58
CDH6P55285 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDH6P55285 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH6P55285 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH6P55285 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 AC068446.1-201ENST00000556425 1549 ntBASIC5.2□□□□□ -1.58
CDH6P55285 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH6P55285 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CDH6P55285 SNORA66-201ENST00000384792 133 ntBASIC5.2□□□□□ -1.58
CDH6P55285 ATP5HP3-201ENST00000396994 486 ntBASIC5.2□□□□□ -1.58
CDH6P55285 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH6P55285 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH6P55285 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.2□□□□□ -1.58
CDH6P55285 RPL34P20-201ENST00000442771 351 ntBASIC5.2□□□□□ -1.58
CDH6P55285 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH6P55285 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH6P55285 HMGN2P25-201ENST00000486956 268 ntBASIC5.2□□□□□ -1.58
CDH6P55285 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH6P55285 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH6P55285 RNA5SP92-201ENST00000516437 110 ntBASIC5.2□□□□□ -1.58
CDH6P55285 AP006245.2-201ENST00000522004 300 ntBASIC5.2□□□□□ -1.58
CDH6P55285 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH6P55285 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH6P55285 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH6P55285 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH6P55285 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.2□□□□□ -1.58
CDH6P55285 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.2□□□□□ -1.58
CDH6P55285 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.2□□□□□ -1.58
CDH6P55285 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 DPRXP4-201ENST00000578053 568 ntBASIC5.2□□□□□ -1.58
CDH6P55285 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.2□□□□□ -1.58
CDH6P55285 AP000894.4-201ENST00000610185 483 ntBASIC5.2□□□□□ -1.58
CDH6P55285 AL121612.2-201ENST00000612261 482 ntBASIC5.2□□□□□ -1.58
CDH6P55285 AC037198.3-201ENST00000616754 526 ntBASIC5.2□□□□□ -1.58
CDH6P55285 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.2□□□□□ -1.58
CDH6P55285 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDH6P55285 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 CR788268.1-201ENST00000603931 1809 ntBASIC5.2□□□□□ -1.58
CDH6P55285 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDH6P55285 NXF4-202ENST00000416098 1465 ntBASIC5.2□□□□□ -1.58
CDH6P55285 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.2□□□□□ -1.58
CDH6P55285 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH6P55285 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH6P55285 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH6P55285 SNURFL-201ENST00000309296 343 ntBASIC5.19□□□□□ -1.58
CDH6P55285 RPL23P2-201ENST00000320371 421 ntBASIC5.19□□□□□ -1.58
CDH6P55285 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDH6P55285 SNORA73.1-201ENST00000363107 205 ntBASIC5.19□□□□□ -1.58
CDH6P55285 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CDH6P55285 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH6P55285 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH6P55285 RN7SKP273-201ENST00000411392 314 ntBASIC5.19□□□□□ -1.58
CDH6P55285 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH6P55285 QRSL1P2-201ENST00000418582 964 ntBASIC5.19□□□□□ -1.58
CDH6P55285 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.19□□□□□ -1.58
CDH6P55285 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CDH6P55285 RPS17P2-201ENST00000461663 408 ntBASIC5.19□□□□□ -1.58
CDH6P55285 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH6P55285 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.19□□□□□ -1.58
CDH6P55285 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH6P55285 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.19□□□□□ -1.58
CDH6P55285 MTND2P17-201ENST00000550281 688 ntBASIC5.19□□□□□ -1.58
CDH6P55285 NMNAT1P1-201ENST00000554095 876 ntBASIC5.19□□□□□ -1.58
CDH6P55285 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH6P55285 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH6P55285 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.19□□□□□ -1.58
CDH6P55285 AC087468.1-201ENST00000604365 630 ntBASIC5.19□□□□□ -1.58
CDH6P55285 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.19□□□□□ -1.58
CDH6P55285 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH6P55285 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CDH6P55285 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.19□□□□□ -1.58
CDH6P55285 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CDH6P55285 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CDH6P55285 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
CDH6P55285 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms