Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNA3P52797 RN7SKP95-201ENST00000362860 303 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.79□□□□□ -1.64
EFNA3P52797 SNORA5.1-201ENST00000384275 131 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 RNA5SP241-201ENST00000391326 114 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 AL645733.1-201ENST00000402250 217 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 GPS2P1-201ENST00000411761 986 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
EFNA3P52797 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.79□□□□□ -1.64
EFNA3P52797 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.79□□□□□ -1.64
EFNA3P52797 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.79□□□□□ -1.64
EFNA3P52797 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNA3P52797 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
EFNA3P52797 RPL7AP61-201ENST00000443410 636 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 OR52Y1P-201ENST00000452418 828 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 RN7SL97P-201ENST00000486780 299 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.79□□□□□ -1.64
EFNA3P52797 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNA3P52797 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.79□□□□□ -1.64
EFNA3P52797 MRPS33P2-201ENST00000507850 322 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNA3P52797 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.79□□□□□ -1.64
EFNA3P52797 RNA5SP43-201ENST00000516559 110 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.79□□□□□ -1.64
EFNA3P52797 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNA3P52797 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.79□□□□□ -1.64
EFNA3P52797 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
EFNA3P52797 AC011840.5-201ENST00000582125 771 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 MEMO1P5-201ENST00000604810 406 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 AC087783.2-201ENST00000605070 562 ntBASIC4.79□□□□□ -1.64
EFNA3P52797 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNA3P52797 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNA3P52797 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
EFNA3P52797 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
EFNA3P52797 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EFNA3P52797 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.79□□□□□ -1.64
EFNA3P52797 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.79□□□□□ -1.64
EFNA3P52797 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
EFNA3P52797 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.79□□□□□ -1.64
EFNA3P52797 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
EFNA3P52797 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
EFNA3P52797 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 RN7SKP153-201ENST00000365026 316 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 RNA5SP428-201ENST00000365129 132 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 OR1L6-202ENST00000373684 1044 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
EFNA3P52797 MIR550A3-201ENST00000390735 95 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 RNA5SP296-201ENST00000410523 111 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.78□□□□□ -1.64
EFNA3P52797 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.78□□□□□ -1.64
EFNA3P52797 DDX39BP1-205ENST00000422507 192 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 AC090018.1-201ENST00000434369 367 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 snoU13.20-201ENST00000459180 104 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 RPS23P1-201ENST00000491662 432 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 NDUFB5P1-201ENST00000508134 564 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 AC002456.2-201ENST00000509356 380 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.78□□□□□ -1.64
EFNA3P52797 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.78□□□□□ -1.64
EFNA3P52797 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 MIR4646-201ENST00000580775 63 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 Mico1.1-201ENST00000611698 204 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 AL445528.2-201ENST00000620582 470 ntBASIC4.78□□□□□ -1.64
EFNA3P52797 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.78□□□□□ -1.64
EFNA3P52797 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.78□□□□□ -1.64
EFNA3P52797 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
EFNA3P52797 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.78□□□□□ -1.64
EFNA3P52797 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
EFNA3P52797 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.65
EFNA3P52797 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
EFNA3P52797 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
EFNA3P52797 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
EFNA3P52797 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
EFNA3P52797 IRF5P1-201ENST00000504852 2164 ntBASIC4.77□□□□□ -1.65
EFNA3P52797 AC131971.1-201ENST00000332881 1482 ntBASIC4.77□□□□□ -1.65
EFNA3P52797 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.77□□□□□ -1.65
EFNA3P52797 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.77□□□□□ -1.65
EFNA3P52797 RNU6-1331P-201ENST00000363658 106 ntBASIC4.77□□□□□ -1.65
EFNA3P52797 RNA5SP187-201ENST00000384400 119 ntBASIC4.77□□□□□ -1.65
EFNA3P52797 AL078599.1-201ENST00000402075 293 ntBASIC4.77□□□□□ -1.65
EFNA3P52797 CASKP1-201ENST00000412870 582 ntBASIC4.77□□□□□ -1.65
EFNA3P52797 RPL12P9-201ENST00000412942 488 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms