Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 RNA5SP241-201ENST00000391326 114 ntBASIC5.92□□□□□ -1.46
CIITAP33076 RN7SKP278-201ENST00000410504 342 ntBASIC5.92□□□□□ -1.46
CIITAP33076 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.92□□□□□ -1.46
CIITAP33076 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.92□□□□□ -1.46
CIITAP33076 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CIITAP33076 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.92□□□□□ -1.46
CIITAP33076 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.92□□□□□ -1.46
CIITAP33076 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC5.92□□□□□ -1.46
CIITAP33076 RPL19P16-201ENST00000433839 588 ntBASIC5.92□□□□□ -1.46
CIITAP33076 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.92□□□□□ -1.46
CIITAP33076 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.92□□□□□ -1.46
CIITAP33076 GAPDHP14-201ENST00000450472 937 ntBASIC5.92□□□□□ -1.46
CIITAP33076 AC009127.1-201ENST00000467090 155 ntBASIC5.92□□□□□ -1.46
CIITAP33076 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.92□□□□□ -1.46
CIITAP33076 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.92□□□□□ -1.46
CIITAP33076 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.92□□□□□ -1.46
CIITAP33076 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.92□□□□□ -1.46
CIITAP33076 AC092709.1-201ENST00000521355 1045 ntBASIC5.92□□□□□ -1.46
CIITAP33076 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.92□□□□□ -1.46
CIITAP33076 AC005000.1-201ENST00000536192 288 ntBASIC5.92□□□□□ -1.46
CIITAP33076 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.92□□□□□ -1.46
CIITAP33076 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.92□□□□□ -1.46
CIITAP33076 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.92□□□□□ -1.46
CIITAP33076 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.92□□□□□ -1.46
CIITAP33076 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CIITAP33076 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.92□□□□□ -1.46
CIITAP33076 RN7SL708P-201ENST00000580952 299 ntBASIC5.92□□□□□ -1.46
CIITAP33076 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.92□□□□□ -1.46
CIITAP33076 TAS2R6P-201ENST00000605022 826 ntBASIC5.92□□□□□ -1.46
CIITAP33076 AC026979.4-201ENST00000606555 645 ntBASIC5.92□□□□□ -1.46
CIITAP33076 AC034229.4-201ENST00000607861 441 ntBASIC5.92□□□□□ -1.46
CIITAP33076 AL391834.2-201ENST00000609982 546 ntBASIC5.92□□□□□ -1.46
CIITAP33076 MIR6719-201ENST00000622428 87 ntBASIC5.92□□□□□ -1.46
CIITAP33076 AC018445.2-201ENST00000622987 260 ntBASIC5.92□□□□□ -1.46
CIITAP33076 AC099494.2-201ENST00000623371 978 ntBASIC5.92□□□□□ -1.46
CIITAP33076 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CIITAP33076 LINC01739-205ENST00000641890 573 ntBASIC5.92□□□□□ -1.46
CIITAP33076 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.92□□□□□ -1.46
CIITAP33076 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CIITAP33076 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CIITAP33076 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.92□□□□□ -1.46
CIITAP33076 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.92□□□□□ -1.46
CIITAP33076 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CIITAP33076 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CIITAP33076 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CIITAP33076 AC125336.1-201ENST00000508893 2827 ntBASIC5.92□□□□□ -1.46
CIITAP33076 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CIITAP33076 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CIITAP33076 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.91□□□□□ -1.46
CIITAP33076 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CIITAP33076 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CIITAP33076 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 RPL23P2-201ENST00000320371 421 ntBASIC5.91□□□□□ -1.46
CIITAP33076 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 OR13C3-201ENST00000374781 1108 ntBASIC5.91□□□□□ -1.46
CIITAP33076 MIR765-201ENST00000390226 114 ntBASIC5.91□□□□□ -1.46
CIITAP33076 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.91□□□□□ -1.46
CIITAP33076 SPTLC1P2-201ENST00000407089 121 ntBASIC5.91□□□□□ -1.46
CIITAP33076 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.91□□□□□ -1.46
CIITAP33076 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.91□□□□□ -1.46
CIITAP33076 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.91□□□□□ -1.46
CIITAP33076 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.91□□□□□ -1.46
CIITAP33076 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.91□□□□□ -1.46
CIITAP33076 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.91□□□□□ -1.46
CIITAP33076 RAB28P3-201ENST00000448325 597 ntBASIC5.91□□□□□ -1.46
CIITAP33076 MTND2P25-201ENST00000449028 610 ntBASIC5.91□□□□□ -1.46
CIITAP33076 AURKAPS1-201ENST00000451805 1212 ntBASIC5.91□□□□□ -1.46
CIITAP33076 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.91□□□□□ -1.46
CIITAP33076 AC004815.1-201ENST00000484185 331 ntBASIC5.91□□□□□ -1.46
CIITAP33076 AC091544.1-201ENST00000484702 348 ntBASIC5.91□□□□□ -1.46
CIITAP33076 RPSAP51-201ENST00000497462 645 ntBASIC5.91□□□□□ -1.46
CIITAP33076 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CIITAP33076 AC119751.4-201ENST00000507498 357 ntBASIC5.91□□□□□ -1.46
CIITAP33076 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.91□□□□□ -1.46
CIITAP33076 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.91□□□□□ -1.46
CIITAP33076 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.91□□□□□ -1.46
CIITAP33076 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.91□□□□□ -1.46
CIITAP33076 OR10G5P-201ENST00000532733 358 ntBASIC5.91□□□□□ -1.46
CIITAP33076 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.91□□□□□ -1.46
CIITAP33076 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 AC125612.1-201ENST00000547580 377 ntBASIC5.91□□□□□ -1.46
CIITAP33076 DUX4L52-201ENST00000549363 777 ntBASIC5.91□□□□□ -1.46
CIITAP33076 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.91□□□□□ -1.46
CIITAP33076 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.91□□□□□ -1.46
CIITAP33076 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.91□□□□□ -1.46
CIITAP33076 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.91□□□□□ -1.46
CIITAP33076 BNIP3P40-201ENST00000596017 556 ntBASIC5.91□□□□□ -1.46
CIITAP33076 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.91□□□□□ -1.46
CIITAP33076 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.91□□□□□ -1.46
CIITAP33076 AL391834.1-201ENST00000609609 560 ntBASIC5.91□□□□□ -1.46
CIITAP33076 AC118658.2-201ENST00000618697 459 ntBASIC5.91□□□□□ -1.46
CIITAP33076 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CIITAP33076 AC119674.1-220ENST00000641502 1048 ntBASIC5.91□□□□□ -1.46
CIITAP33076 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CIITAP33076 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms