Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.42□□□□□ -1.54
CHRNA3P32297 OR5M14P-201ENST00000506803 618 ntBASIC5.42□□□□□ -1.54
CHRNA3P32297 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.42□□□□□ -1.54
CHRNA3P32297 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.42□□□□□ -1.54
CHRNA3P32297 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.42□□□□□ -1.54
CHRNA3P32297 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CHRNA3P32297 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.42□□□□□ -1.54
CHRNA3P32297 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.42□□□□□ -1.54
CHRNA3P32297 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.42□□□□□ -1.54
CHRNA3P32297 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.42□□□□□ -1.54
CHRNA3P32297 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.42□□□□□ -1.54
CHRNA3P32297 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.42□□□□□ -1.54
CHRNA3P32297 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.42□□□□□ -1.54
CHRNA3P32297 AP000919.1-201ENST00000582850 985 ntBASIC5.42□□□□□ -1.54
CHRNA3P32297 MIR3936-201ENST00000584304 110 ntBASIC5.42□□□□□ -1.54
CHRNA3P32297 Z95327.3-201ENST00000610385 572 ntBASIC5.42□□□□□ -1.54
CHRNA3P32297 AC118658.2-201ENST00000618697 459 ntBASIC5.42□□□□□ -1.54
CHRNA3P32297 AC018445.2-201ENST00000622987 260 ntBASIC5.42□□□□□ -1.54
CHRNA3P32297 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.42□□□□□ -1.54
CHRNA3P32297 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA3P32297 AC010266.2-201ENST00000564741 3255 ntBASIC5.42□□□□□ -1.54
CHRNA3P32297 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA3P32297 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA3P32297 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CHRNA3P32297 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.42□□□□□ -1.54
CHRNA3P32297 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CHRNA3P32297 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CHRNA3P32297 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CHRNA3P32297 RLIMP2-201ENST00000427891 1563 ntBASIC5.42□□□□□ -1.54
CHRNA3P32297 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.42□□□□□ -1.54
CHRNA3P32297 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA3P32297 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA3P32297 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA3P32297 AL022393.1-201ENST00000625142 1677 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 AL672167.1-204ENST00000641875 3017 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA3P32297 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA3P32297 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA3P32297 RNU6-249P-201ENST00000363016 102 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 RNU1-43P-201ENST00000365052 165 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 RN7SKP273-201ENST00000411392 314 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 CASKP1-201ENST00000412870 582 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AC104634.1-201ENST00000452720 462 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AC004815.1-201ENST00000484185 331 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 OR11I1P-201ENST00000486033 954 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 AC015864.1-201ENST00000496512 544 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.41□□□□□ -1.54
CHRNA3P32297 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AC020937.1-201ENST00000519677 1013 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AC084033.1-201ENST00000550830 633 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 AC127381.1-201ENST00000555979 939 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.41□□□□□ -1.54
CHRNA3P32297 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.41□□□□□ -1.54
CHRNA3P32297 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.41□□□□□ -1.54
CHRNA3P32297 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
CHRNA3P32297 AC037198.3-201ENST00000616754 526 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA3P32297 AC015914.2-201ENST00000618167 288 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.41□□□□□ -1.54
CHRNA3P32297 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
CHRNA3P32297 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA3P32297 ZNF733P-202ENST00000444809 1573 ntBASIC5.41□□□□□ -1.54
CHRNA3P32297 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.41□□□□□ -1.54
CHRNA3P32297 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CHRNA3P32297 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
CHRNA3P32297 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CHRNA3P32297 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CHRNA3P32297 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA3P32297 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA3P32297 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA3P32297 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
CHRNA3P32297 SMG1P4-204ENST00000523028 4131 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNA3P32297 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.4□□□□□ -1.54
CHRNA3P32297 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA3P32297 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA3P32297 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CHRNA3P32297 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
CHRNA3P32297 AL022322.2-201ENST00000624072 20397 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
CHRNA3P32297 RNU1-146P-201ENST00000364015 165 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA3P32297 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA3P32297 OR8V1P-201ENST00000395193 873 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 AL035079.1-201ENST00000405210 287 ntBASIC5.4□□□□□ -1.54
CHRNA3P32297 U3.32-201ENST00000408116 212 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms