Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC8.24□□□□□ -1.09
CFTRP13569 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
CFTRP13569 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CFTRP13569 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CFTRP13569 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC8.24□□□□□ -1.09
CFTRP13569 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CFTRP13569 RNU1-64P-201ENST00000365443 163 ntBASIC8.24□□□□□ -1.09
CFTRP13569 RN7SKP267-201ENST00000410381 285 ntBASIC8.24□□□□□ -1.09
CFTRP13569 CASKP1-201ENST00000412870 582 ntBASIC8.24□□□□□ -1.09
CFTRP13569 RPL36AP36-201ENST00000418616 301 ntBASIC8.24□□□□□ -1.09
CFTRP13569 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.24□□□□□ -1.09
CFTRP13569 RPS12P10-201ENST00000427031 377 ntBASIC8.24□□□□□ -1.09
CFTRP13569 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC8.24□□□□□ -1.09
CFTRP13569 RPSAP51-201ENST00000497462 645 ntBASIC8.24□□□□□ -1.09
CFTRP13569 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC8.24□□□□□ -1.09
CFTRP13569 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CFTRP13569 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC8.24□□□□□ -1.09
CFTRP13569 AC034105.4-201ENST00000568304 277 ntBASIC8.24□□□□□ -1.09
CFTRP13569 MTCYBP13-201ENST00000578634 1093 ntBASIC8.24□□□□□ -1.09
CFTRP13569 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC8.24□□□□□ -1.09
CFTRP13569 AP000547.3-204ENST00000588548 2523 ntBASIC8.24□□□□□ -1.09
CFTRP13569 AC138907.8-201ENST00000623981 2256 ntBASIC8.24□□□□□ -1.09
CFTRP13569 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
CFTRP13569 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CFTRP13569 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CFTRP13569 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CFTRP13569 AC025750.1-201ENST00000399891 379 ntBASIC8.23□□□□□ -1.09
CFTRP13569 AL445189.1-201ENST00000405722 338 ntBASIC8.23□□□□□ -1.09
CFTRP13569 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC8.23□□□□□ -1.09
CFTRP13569 AC106806.2-201ENST00000509365 500 ntBASIC8.23□□□□□ -1.09
CFTRP13569 AC025884.1-201ENST00000556034 378 ntBASIC8.23□□□□□ -1.09
CFTRP13569 MIR4429-201ENST00000580105 73 ntBASIC8.23□□□□□ -1.09
CFTRP13569 MIR4420-201ENST00000583944 77 ntBASIC8.23□□□□□ -1.09
CFTRP13569 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC8.23□□□□□ -1.09
CFTRP13569 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CFTRP13569 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CFTRP13569 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC8.23□□□□□ -1.09
CFTRP13569 AL122126.1-201ENST00000546905 1318 ntBASIC8.23□□□□□ -1.09
CFTRP13569 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CFTRP13569 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CFTRP13569 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
CFTRP13569 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CFTRP13569 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CFTRP13569 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
CFTRP13569 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CFTRP13569 RNU1-82P-201ENST00000390851 165 ntBASIC8.22□□□□□ -1.09
CFTRP13569 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CFTRP13569 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC8.22□□□□□ -1.09
CFTRP13569 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC8.22□□□□□ -1.09
CFTRP13569 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC8.22□□□□□ -1.09
CFTRP13569 RN7SL517P-201ENST00000462240 305 ntBASIC8.22□□□□□ -1.09
CFTRP13569 RN7SL558P-201ENST00000497468 299 ntBASIC8.22□□□□□ -1.09
CFTRP13569 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC8.22□□□□□ -1.09
CFTRP13569 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC8.22□□□□□ -1.09
CFTRP13569 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.22□□□□□ -1.09
CFTRP13569 AC018695.5-201ENST00000605872 315 ntBASIC8.22□□□□□ -1.09
CFTRP13569 AL023881.1-201ENST00000621088 301 ntBASIC8.22□□□□□ -1.09
CFTRP13569 AC034229.5-201ENST00000624258 185 ntBASIC8.22□□□□□ -1.09
CFTRP13569 AC008785.1-201ENST00000624475 456 ntBASIC8.22□□□□□ -1.09
CFTRP13569 AP000843.1-201ENST00000624880 701 ntBASIC8.22□□□□□ -1.09
CFTRP13569 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CFTRP13569 UQCRC2P1-201ENST00000417777 1332 ntBASIC8.22□□□□□ -1.09
CFTRP13569 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CFTRP13569 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CFTRP13569 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CFTRP13569 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CFTRP13569 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CFTRP13569 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
CFTRP13569 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC8.21□□□□□ -1.09
CFTRP13569 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC8.21□□□□□ -1.09
CFTRP13569 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CFTRP13569 RNA5SP317-201ENST00000410176 116 ntBASIC8.21□□□□□ -1.09
CFTRP13569 RNA5SP311-201ENST00000411290 116 ntBASIC8.21□□□□□ -1.09
CFTRP13569 RPL7AP25-201ENST00000423357 805 ntBASIC8.21□□□□□ -1.09
CFTRP13569 RPS17P8-201ENST00000434525 335 ntBASIC8.21□□□□□ -1.09
CFTRP13569 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC8.21□□□□□ -1.09
CFTRP13569 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC8.21□□□□□ -1.09
CFTRP13569 SNORA84-201ENST00000459229 133 ntBASIC8.21□□□□□ -1.09
CFTRP13569 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC8.21□□□□□ -1.09
CFTRP13569 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC8.21□□□□□ -1.09
CFTRP13569 RNA5SP315-201ENST00000516340 116 ntBASIC8.21□□□□□ -1.09
CFTRP13569 RNA5SP312-201ENST00000517068 116 ntBASIC8.21□□□□□ -1.09
CFTRP13569 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC8.21□□□□□ -1.09
CFTRP13569 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CFTRP13569 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC8.21□□□□□ -1.1
CFTRP13569 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.21□□□□□ -1.1
CFTRP13569 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CFTRP13569 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CFTRP13569 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
CFTRP13569 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CFTRP13569 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CFTRP13569 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CFTRP13569 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC8.2□□□□□ -1.1
CFTRP13569 SLC4A1APP1-201ENST00000419995 602 ntBASIC8.2□□□□□ -1.1
CFTRP13569 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC8.2□□□□□ -1.1
CFTRP13569 RN7SL303P-201ENST00000469773 251 ntBASIC8.2□□□□□ -1.1
CFTRP13569 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC8.2□□□□□ -1.1
CFTRP13569 MED28P5-201ENST00000528254 438 ntBASIC8.2□□□□□ -1.1
CFTRP13569 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC8.2□□□□□ -1.1
CFTRP13569 RN7SL290P-201ENST00000578661 300 ntBASIC8.2□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms