Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 NPM1P26-201ENST00000426339 738 ntBASIC5.17□□□□□ -1.58
CDH1P12830 DSTNP5-201ENST00000427921 523 ntBASIC5.17□□□□□ -1.58
CDH1P12830 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH1P12830 AC012512.1-201ENST00000446594 718 ntBASIC5.17□□□□□ -1.58
CDH1P12830 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH1P12830 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH1P12830 TPT1P1-201ENST00000458495 518 ntBASIC5.17□□□□□ -1.58
CDH1P12830 AC245028.2-201ENST00000458673 253 ntBASIC5.17□□□□□ -1.58
CDH1P12830 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH1P12830 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH1P12830 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH1P12830 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH1P12830 AC106872.4-201ENST00000510050 523 ntBASIC5.17□□□□□ -1.58
CDH1P12830 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH1P12830 RNU6-415P-201ENST00000516252 97 ntBASIC5.17□□□□□ -1.58
CDH1P12830 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH1P12830 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH1P12830 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.17□□□□□ -1.58
CDH1P12830 AC127381.1-201ENST00000555979 939 ntBASIC5.17□□□□□ -1.58
CDH1P12830 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH1P12830 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH1P12830 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.17□□□□□ -1.58
CDH1P12830 MIR3936-201ENST00000584304 110 ntBASIC5.17□□□□□ -1.58
CDH1P12830 AL450270.1-201ENST00000606160 391 ntBASIC5.17□□□□□ -1.58
CDH1P12830 AC016957.2-201ENST00000616998 848 ntBASIC5.17□□□□□ -1.58
CDH1P12830 AL049777.1-201ENST00000622740 518 ntBASIC5.17□□□□□ -1.58
CDH1P12830 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH1P12830 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.17□□□□□ -1.58
CDH1P12830 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.17□□□□□ -1.58
CDH1P12830 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
CDH1P12830 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
CDH1P12830 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CDH1P12830 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 AC025574.1-201ENST00000554784 1653 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AL034549.2-201ENST00000618285 3373 ntBASIC5.16□□□□□ -1.58
CDH1P12830 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 RNU6-697P-201ENST00000363348 107 ntBASIC5.16□□□□□ -1.58
CDH1P12830 SNORD51.1-201ENST00000365405 77 ntBASIC5.16□□□□□ -1.58
CDH1P12830 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDH1P12830 MIR143-201ENST00000385300 106 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AC009804.1-201ENST00000400949 179 ntBASIC5.16□□□□□ -1.58
CDH1P12830 HSPA8P15-201ENST00000401676 786 ntBASIC5.16□□□□□ -1.58
CDH1P12830 RNA5SP487-201ENST00000410186 122 ntBASIC5.16□□□□□ -1.58
CDH1P12830 RPL12P9-201ENST00000412942 488 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 TRIM60P17-201ENST00000415181 719 ntBASIC5.16□□□□□ -1.58
CDH1P12830 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.16□□□□□ -1.58
CDH1P12830 AL133325.1-201ENST00000421090 382 ntBASIC5.16□□□□□ -1.58
CDH1P12830 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH1P12830 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH1P12830 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH1P12830 RNF2P1-201ENST00000442955 1010 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH1P12830 GAPDHP25-201ENST00000447061 1001 ntBASIC5.16□□□□□ -1.58
CDH1P12830 SIAH1P1-201ENST00000479411 923 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AC058823.1-201ENST00000485315 474 ntBASIC5.16□□□□□ -1.58
CDH1P12830 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 RN7SL447P-201ENST00000494711 245 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AC108693.1-201ENST00000496068 432 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.16□□□□□ -1.58
CDH1P12830 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH1P12830 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
CDH1P12830 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
CDH1P12830 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CDH1P12830 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH1P12830 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH1P12830 BNIP3P40-201ENST00000596017 556 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.16□□□□□ -1.58
CDH1P12830 ABI1P1-201ENST00000603375 1120 ntBASIC5.16□□□□□ -1.58
CDH1P12830 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 AC018645.2-201ENST00000609151 472 ntBASIC5.16□□□□□ -1.58
CDH1P12830 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH1P12830 AC109583.2-201ENST00000617367 129 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AP003499.2-201ENST00000624100 483 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AP003400.3-201ENST00000624904 346 ntBASIC5.16□□□□□ -1.58
CDH1P12830 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 MIR4302-201ENST00000638058 60 ntBASIC5.16□□□□□ -1.58
CDH1P12830 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
CDH1P12830 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH1P12830 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CDH1P12830 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms