Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CD28P10747 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
CD28P10747 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CD28P10747 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.01□□□□□ -1.77
CD28P10747 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CD28P10747 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CD28P10747 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
CD28P10747 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 HSPA8P14-201ENST00000552265 1805 ntBASIC4□□□□□ -1.77
CD28P10747 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4□□□□□ -1.77
CD28P10747 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4□□□□□ -1.77
CD28P10747 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4□□□□□ -1.77
CD28P10747 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 MAX-203ENST00000341653 330 ntTSL 2 BASIC4□□□□□ -1.77
CD28P10747 RNA5SP428-201ENST00000365129 132 ntBASIC4□□□□□ -1.77
CD28P10747 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 SNORA66-201ENST00000384792 133 ntBASIC4□□□□□ -1.77
CD28P10747 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4□□□□□ -1.77
CD28P10747 CYB5AP4-201ENST00000396692 399 ntBASIC4□□□□□ -1.77
CD28P10747 MTND4LP21-201ENST00000415303 295 ntBASIC4□□□□□ -1.77
CD28P10747 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4□□□□□ -1.77
CD28P10747 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4□□□□□ -1.77
CD28P10747 AL136231.1-201ENST00000429407 730 ntBASIC4□□□□□ -1.77
CD28P10747 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4□□□□□ -1.77
CD28P10747 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4□□□□□ -1.77
CD28P10747 FTLP19-201ENST00000433300 394 ntBASIC4□□□□□ -1.77
CD28P10747 AC008072.1-201ENST00000434254 824 ntBASIC4□□□□□ -1.77
CD28P10747 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4□□□□□ -1.77
CD28P10747 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CD28P10747 H2AFZP6-201ENST00000444403 394 ntBASIC4□□□□□ -1.77
CD28P10747 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4□□□□□ -1.77
CD28P10747 RPL5P16-201ENST00000471467 790 ntBASIC4□□□□□ -1.77
CD28P10747 RPL7P41-201ENST00000485823 957 ntBASIC4□□□□□ -1.77
CD28P10747 AC140172.1-201ENST00000502928 141 ntBASIC4□□□□□ -1.77
CD28P10747 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 BTF3P13-201ENST00000513224 490 ntBASIC4□□□□□ -1.77
CD28P10747 OR7E128P-201ENST00000532736 1024 ntBASIC4□□□□□ -1.77
CD28P10747 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4□□□□□ -1.77
CD28P10747 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4□□□□□ -1.77
CD28P10747 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 AC008033.2-201ENST00000542626 177 ntBASIC4□□□□□ -1.77
CD28P10747 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4□□□□□ -1.77
CD28P10747 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4□□□□□ -1.77
CD28P10747 AL031320.1-201ENST00000604177 357 ntBASIC4□□□□□ -1.77
CD28P10747 AC112694.2-201ENST00000623697 768 ntBASIC4□□□□□ -1.77
CD28P10747 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CD28P10747 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 AC007996.1-201ENST00000620414 2821 ntBASIC4□□□□□ -1.77
CD28P10747 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4□□□□□ -1.77
CD28P10747 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4□□□□□ -1.77
CD28P10747 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CD28P10747 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4□□□□□ -1.77
CD28P10747 AC083899.1-201ENST00000454465 3819 ntBASIC4□□□□□ -1.77
CD28P10747 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4□□□□□ -1.77
CD28P10747 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD28P10747 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.99□□□□□ -1.77
CD28P10747 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
CD28P10747 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CD28P10747 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC3.99□□□□□ -1.77
CD28P10747 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD28P10747 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD28P10747 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CD28P10747 CUL4AP1-201ENST00000514750 1863 ntBASIC3.99□□□□□ -1.77
CD28P10747 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CD28P10747 RMST-209ENST00000639542 3269 ntTSL 5 BASIC3.99□□□□□ -1.77
CD28P10747 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CD28P10747 RN7SKP149-201ENST00000363008 344 ntBASIC3.99□□□□□ -1.77
CD28P10747 RN7SKP153-201ENST00000365026 316 ntBASIC3.99□□□□□ -1.77
CD28P10747 RNU6-167P-201ENST00000384292 106 ntBASIC3.99□□□□□ -1.77
CD28P10747 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CD28P10747 AL358178.1-201ENST00000407698 397 ntBASIC3.99□□□□□ -1.77
CD28P10747 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CD28P10747 RPL26P29-201ENST00000415623 438 ntBASIC3.99□□□□□ -1.77
CD28P10747 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC3.99□□□□□ -1.77
CD28P10747 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CD28P10747 AC124944.2-201ENST00000429866 1242 ntBASIC3.99□□□□□ -1.77
CD28P10747 NFYAP1-201ENST00000431953 972 ntBASIC3.99□□□□□ -1.77
CD28P10747 AC090018.1-201ENST00000434369 367 ntBASIC3.99□□□□□ -1.77
CD28P10747 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.99□□□□□ -1.77
CD28P10747 KNOP1P3-201ENST00000446933 426 ntBASIC3.99□□□□□ -1.77
CD28P10747 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC3.99□□□□□ -1.77
CD28P10747 AC020779.1-201ENST00000478757 796 ntBASIC3.99□□□□□ -1.77
CD28P10747 COX6B1P5-201ENST00000509843 249 ntBASIC3.99□□□□□ -1.77
CD28P10747 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.99□□□□□ -1.77
CD28P10747 AC092593.2-201ENST00000513866 913 ntBASIC3.99□□□□□ -1.77
CD28P10747 AC022360.1-201ENST00000521058 340 ntBASIC3.99□□□□□ -1.77
CD28P10747 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC3.99□□□□□ -1.77
CD28P10747 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC3.99□□□□□ -1.77
CD28P10747 AC021006.3-201ENST00000530771 192 ntBASIC3.99□□□□□ -1.77
CD28P10747 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC3.99□□□□□ -1.77
CD28P10747 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
CD28P10747 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.99□□□□□ -1.77
CD28P10747 AC009852.2-201ENST00000567898 485 ntBASIC3.99□□□□□ -1.77
CD28P10747 AC011626.1-201ENST00000604710 562 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms