Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 BCORP1-203ENST00000513194 5093 ntBASIC5.79□□□□□ -1.48
COL2A1P02458 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.79□□□□□ -1.48
COL2A1P02458 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
COL2A1P02458 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL2A1P02458 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.79□□□□□ -1.48
COL2A1P02458 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.79□□□□□ -1.48
COL2A1P02458 ABCC13-202ENST00000463099 3842 ntBASIC5.79□□□□□ -1.48
COL2A1P02458 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
COL2A1P02458 AC008758.3-201ENST00000507003 1829 ntBASIC5.79□□□□□ -1.48
COL2A1P02458 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.79□□□□□ -1.48
COL2A1P02458 AL137058.3-201ENST00000624531 3099 ntBASIC5.78□□□□□ -1.48
COL2A1P02458 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
COL2A1P02458 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.78□□□□□ -1.48
COL2A1P02458 RNA5SP388-201ENST00000362584 119 ntBASIC5.78□□□□□ -1.48
COL2A1P02458 SNORA70F-201ENST00000384142 135 ntBASIC5.78□□□□□ -1.48
COL2A1P02458 RNU11-201ENST00000387069 134 ntBASIC5.78□□□□□ -1.48
COL2A1P02458 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
COL2A1P02458 AL645608.4-201ENST00000423619 154 ntBASIC5.78□□□□□ -1.48
COL2A1P02458 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.78□□□□□ -1.48
COL2A1P02458 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.78□□□□□ -1.48
COL2A1P02458 RN7SL41P-201ENST00000476144 297 ntBASIC5.78□□□□□ -1.48
COL2A1P02458 ENPP7P11-201ENST00000505915 627 ntBASIC5.78□□□□□ -1.48
COL2A1P02458 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.78□□□□□ -1.48
COL2A1P02458 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.78□□□□□ -1.48
COL2A1P02458 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.78□□□□□ -1.48
COL2A1P02458 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COL2A1P02458 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.78□□□□□ -1.48
COL2A1P02458 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.78□□□□□ -1.48
COL2A1P02458 AL360012.1-201ENST00000602813 131 ntBASIC5.78□□□□□ -1.48
COL2A1P02458 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.78□□□□□ -1.48
COL2A1P02458 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
COL2A1P02458 AL360270.2-201ENST00000562952 5985 ntBASIC5.78□□□□□ -1.48
COL2A1P02458 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
COL2A1P02458 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL2A1P02458 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
COL2A1P02458 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
COL2A1P02458 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.78□□□□□ -1.48
COL2A1P02458 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
COL2A1P02458 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.78□□□□□ -1.48
COL2A1P02458 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
COL2A1P02458 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
COL2A1P02458 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
COL2A1P02458 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.77□□□□□ -1.49
COL2A1P02458 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL2A1P02458 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.77□□□□□ -1.49
COL2A1P02458 AC069213.2-201ENST00000420238 366 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.77□□□□□ -1.49
COL2A1P02458 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 RN7SL517P-201ENST00000462240 305 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AC104971.1-201ENST00000495117 578 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC5.77□□□□□ -1.49
COL2A1P02458 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.77□□□□□ -1.49
COL2A1P02458 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.77□□□□□ -1.49
COL2A1P02458 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.77□□□□□ -1.49
COL2A1P02458 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.77□□□□□ -1.49
COL2A1P02458 AC079791.1-201ENST00000605356 973 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AC026367.3-201ENST00000619032 590 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AC091932.2-201ENST00000623014 291 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL2A1P02458 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.77□□□□□ -1.49
COL2A1P02458 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL2A1P02458 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.77□□□□□ -1.49
COL2A1P02458 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL2A1P02458 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.77□□□□□ -1.49
COL2A1P02458 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.77□□□□□ -1.49
COL2A1P02458 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.77□□□□□ -1.49
COL2A1P02458 AL031123.3-201ENST00000623345 1837 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL2A1P02458 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL2A1P02458 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
COL2A1P02458 AL590240.1-201ENST00000334118 313 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
COL2A1P02458 MIR298-201ENST00000401212 88 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AL357515.1-201ENST00000402967 542 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.77□□□□□ -1.49
COL2A1P02458 GLUD1P9-201ENST00000420997 1173 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AC009480.2-201ENST00000422916 432 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 FABP7P1-201ENST00000424004 391 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AC016831.4-201ENST00000438302 307 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 OR52E3P-201ENST00000452083 936 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.77□□□□□ -1.49
COL2A1P02458 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.77□□□□□ -1.49
COL2A1P02458 OR5M2P-201ENST00000529003 936 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.77□□□□□ -1.49
COL2A1P02458 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.77□□□□□ -1.49
COL2A1P02458 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.77□□□□□ -1.49
COL2A1P02458 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
COL2A1P02458 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.77□□□□□ -1.49
COL2A1P02458 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.77□□□□□ -1.49
COL2A1P02458 AC007497.1-201ENST00000610421 561 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 AL022401.1-201ENST00000619498 108 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 MIR6853-201ENST00000619642 74 ntBASIC5.77□□□□□ -1.49
COL2A1P02458 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
COL2A1P02458 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.76□□□□□ -1.49
COL2A1P02458 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
COL2A1P02458 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 CASC19-260ENST00000641828 2001 ntBASIC5.76□□□□□ -1.49
COL2A1P02458 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
COL2A1P02458 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
COL2A1P02458 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms