Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TNFP01375 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
TNFP01375 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TNFP01375 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.85□□□□□ -1.63
TNFP01375 A2MP1-204ENST00000566278 4130 ntBASIC4.85□□□□□ -1.63
TNFP01375 AC015813.6-201ENST00000624409 5808 ntBASIC4.84□□□□□ -1.63
TNFP01375 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
TNFP01375 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TNFP01375 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.84□□□□□ -1.63
TNFP01375 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
TNFP01375 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
TNFP01375 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TNFP01375 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
TNFP01375 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.84□□□□□ -1.63
TNFP01375 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TNFP01375 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.84□□□□□ -1.63
TNFP01375 AC022417.1-201ENST00000624768 1303 ntBASIC4.84□□□□□ -1.63
TNFP01375 RNA5SP191-201ENST00000362585 102 ntBASIC4.84□□□□□ -1.63
TNFP01375 LRRC37BP1-201ENST00000398851 714 ntBASIC4.84□□□□□ -1.63
TNFP01375 PEX12P1-201ENST00000400284 1048 ntBASIC4.84□□□□□ -1.63
TNFP01375 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.84□□□□□ -1.63
TNFP01375 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.84□□□□□ -1.63
TNFP01375 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.84□□□□□ -1.63
TNFP01375 AC093414.1-201ENST00000434712 514 ntBASIC4.84□□□□□ -1.63
TNFP01375 RPL5P25-201ENST00000441148 775 ntBASIC4.84□□□□□ -1.63
TNFP01375 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TNFP01375 AURKAPS2-201ENST00000454983 333 ntBASIC4.84□□□□□ -1.63
TNFP01375 RN7SL205P-201ENST00000490174 284 ntBASIC4.84□□□□□ -1.63
TNFP01375 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.84□□□□□ -1.63
TNFP01375 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC4.84□□□□□ -1.63
TNFP01375 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.84□□□□□ -1.63
TNFP01375 SNORA70.11-201ENST00000515987 138 ntBASIC4.84□□□□□ -1.63
TNFP01375 SNORA70.13-201ENST00000516116 138 ntBASIC4.84□□□□□ -1.63
TNFP01375 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
TNFP01375 RN7SL52P-201ENST00000584271 284 ntBASIC4.84□□□□□ -1.63
TNFP01375 AL512782.1-201ENST00000603093 364 ntBASIC4.84□□□□□ -1.63
TNFP01375 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.84□□□□□ -1.63
TNFP01375 RN7SL722P-201ENST00000617780 284 ntBASIC4.84□□□□□ -1.63
TNFP01375 RN7SL565P-201ENST00000618246 284 ntBASIC4.84□□□□□ -1.63
TNFP01375 CR381572.2-201ENST00000624852 397 ntBASIC4.84□□□□□ -1.63
TNFP01375 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.84□□□□□ -1.63
TNFP01375 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.84□□□□□ -1.63
TNFP01375 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TNFP01375 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
TNFP01375 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
TNFP01375 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.84□□□□□ -1.64
TNFP01375 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
TNFP01375 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
TNFP01375 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 AC005261.2-201ENST00000593427 4258 ntBASIC4.83□□□□□ -1.64
TNFP01375 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TNFP01375 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFP01375 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TNFP01375 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
TNFP01375 RPL10P10-201ENST00000403509 664 ntBASIC4.83□□□□□ -1.64
TNFP01375 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFP01375 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFP01375 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFP01375 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 AL691482.1-201ENST00000453255 87 ntBASIC4.83□□□□□ -1.64
TNFP01375 RPL23AP56-201ENST00000460778 453 ntBASIC4.83□□□□□ -1.64
TNFP01375 AC006967.1-201ENST00000467608 589 ntBASIC4.83□□□□□ -1.64
TNFP01375 NPM1P28-201ENST00000492269 840 ntBASIC4.83□□□□□ -1.64
TNFP01375 AL049874.2-201ENST00000492636 288 ntBASIC4.83□□□□□ -1.64
TNFP01375 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFP01375 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFP01375 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFP01375 BNIP3P1-201ENST00000547295 580 ntBASIC4.83□□□□□ -1.64
TNFP01375 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 AC137768.1-201ENST00000549998 553 ntBASIC4.83□□□□□ -1.64
TNFP01375 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFP01375 AC016839.1-201ENST00000578162 867 ntBASIC4.83□□□□□ -1.64
TNFP01375 AP000919.1-201ENST00000582850 985 ntBASIC4.83□□□□□ -1.64
TNFP01375 PRPF19P1-201ENST00000584766 898 ntBASIC4.83□□□□□ -1.64
TNFP01375 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.83□□□□□ -1.64
TNFP01375 AC002069.2-201ENST00000603580 883 ntBASIC4.83□□□□□ -1.64
TNFP01375 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
TNFP01375 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
TNFP01375 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
TNFP01375 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.83□□□□□ -1.64
TNFP01375 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
TNFP01375 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.83□□□□□ -1.64
TNFP01375 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFP01375 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.83□□□□□ -1.64
TNFP01375 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms