Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 Z95152.1-201ENST00000453556 656 ntBASIC5.63□□□□□ -1.51
PROM1O43490 RPL6P9-201ENST00000466502 859 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AC074386.1-201ENST00000476560 767 ntBASIC5.63□□□□□ -1.51
PROM1O43490 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.63□□□□□ -1.51
PROM1O43490 AC008629.2-201ENST00000503783 483 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.63□□□□□ -1.51
PROM1O43490 AC091435.1-201ENST00000505442 584 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AC002456.2-201ENST00000509356 380 ntBASIC5.63□□□□□ -1.51
PROM1O43490 RNU6-1028P-201ENST00000517164 93 ntBASIC5.63□□□□□ -1.51
PROM1O43490 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.63□□□□□ -1.51
PROM1O43490 TRIM77BP-201ENST00000524985 1119 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AC027369.2-201ENST00000528030 440 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.63□□□□□ -1.51
PROM1O43490 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 AC007346.2-201ENST00000564816 892 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AC005244.1-201ENST00000582566 339 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 AC008507.3-201ENST00000585753 472 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.63□□□□□ -1.51
PROM1O43490 AC090236.2-201ENST00000587933 1101 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 AL592494.3-201ENST00000609485 464 ntBASIC5.63□□□□□ -1.51
PROM1O43490 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 AC245014.3-201ENST00000618589 347 ntBASIC5.63□□□□□ -1.51
PROM1O43490 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.63□□□□□ -1.51
PROM1O43490 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.63□□□□□ -1.51
PROM1O43490 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.63□□□□□ -1.51
PROM1O43490 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.63□□□□□ -1.51
PROM1O43490 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.63□□□□□ -1.51
PROM1O43490 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PROM1O43490 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.63□□□□□ -1.51
PROM1O43490 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.63□□□□□ -1.51
PROM1O43490 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PROM1O43490 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.62□□□□□ -1.51
PROM1O43490 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PROM1O43490 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
PROM1O43490 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PROM1O43490 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 OR5H2-201ENST00000355273 945 ntBASIC5.62□□□□□ -1.51
PROM1O43490 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PROM1O43490 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 AC023490.2-201ENST00000359859 470 ntBASIC5.62□□□□□ -1.51
PROM1O43490 RNU6-249P-201ENST00000363016 102 ntBASIC5.62□□□□□ -1.51
PROM1O43490 RNA5SP510-201ENST00000364697 99 ntBASIC5.62□□□□□ -1.51
PROM1O43490 SNORD116-12-201ENST00000384468 92 ntBASIC5.62□□□□□ -1.51
PROM1O43490 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PROM1O43490 HMGB3P7-201ENST00000400214 611 ntBASIC5.62□□□□□ -1.51
PROM1O43490 RPL7P27-201ENST00000403775 720 ntBASIC5.62□□□□□ -1.51
PROM1O43490 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 MIR1302-8-201ENST00000408342 128 ntBASIC5.62□□□□□ -1.51
PROM1O43490 RN7SKP182-201ENST00000410772 298 ntBASIC5.62□□□□□ -1.51
PROM1O43490 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.62□□□□□ -1.51
PROM1O43490 AC090960.1-201ENST00000421072 306 ntBASIC5.62□□□□□ -1.51
PROM1O43490 RPS3P2-201ENST00000421346 701 ntBASIC5.62□□□□□ -1.51
PROM1O43490 OR5M12P-201ENST00000423388 929 ntBASIC5.62□□□□□ -1.51
PROM1O43490 AL354766.1-201ENST00000423396 542 ntBASIC5.62□□□□□ -1.51
PROM1O43490 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.62□□□□□ -1.51
PROM1O43490 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 GTF2IP3-201ENST00000433887 494 ntBASIC5.62□□□□□ -1.51
PROM1O43490 AL445928.1-201ENST00000435545 222 ntBASIC5.62□□□□□ -1.51
PROM1O43490 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.62□□□□□ -1.51
PROM1O43490 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.62□□□□□ -1.51
PROM1O43490 BMS1P10-201ENST00000443754 1120 ntBASIC5.62□□□□□ -1.51
PROM1O43490 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.62□□□□□ -1.51
PROM1O43490 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 AL603882.1-201ENST00000463059 681 ntBASIC5.62□□□□□ -1.51
PROM1O43490 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.62□□□□□ -1.51
PROM1O43490 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.62□□□□□ -1.51
PROM1O43490 TRBV5-2-201ENST00000489095 273 ntBASIC5.62□□□□□ -1.51
PROM1O43490 RPS27AP16-201ENST00000492222 470 ntBASIC5.62□□□□□ -1.51
PROM1O43490 RN7SL284P-201ENST00000498823 275 ntBASIC5.62□□□□□ -1.51
PROM1O43490 LSM3P4-201ENST00000502948 309 ntBASIC5.62□□□□□ -1.51
PROM1O43490 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PROM1O43490 AC118282.2-201ENST00000508739 374 ntBASIC5.62□□□□□ -1.51
PROM1O43490 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.62□□□□□ -1.51
PROM1O43490 MTND1P22-201ENST00000510572 951 ntBASIC5.62□□□□□ -1.51
PROM1O43490 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.62□□□□□ -1.51
PROM1O43490 TOMM22P4-201ENST00000511318 336 ntBASIC5.62□□□□□ -1.51
PROM1O43490 MTATP6P1-201ENST00000514057 681 ntBASIC5.62□□□□□ -1.51
PROM1O43490 RN7SKP238-201ENST00000516483 249 ntBASIC5.62□□□□□ -1.51
PROM1O43490 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.62□□□□□ -1.51
PROM1O43490 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms