Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH17O14917 AC009506.2-201ENST00000420635 840 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 RPS4XP16-201ENST00000427198 791 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH17O14917 BRWD1P3-201ENST00000428816 390 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AL022331.1-201ENST00000429025 477 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AL121776.1-201ENST00000429337 372 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 MTCO1P52-201ENST00000433928 531 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 GAPDHP48-201ENST00000436626 961 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AL353093.1-201ENST00000441292 436 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 MTCO1P53-201ENST00000441633 699 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AC064862.4-201ENST00000442180 334 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH17O14917 HSFY3P-201ENST00000444242 1191 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH17O14917 SEPT14P24-201ENST00000447236 180 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH17O14917 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH17O14917 AC098826.2-201ENST00000452011 651 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 RN7SL72P-201ENST00000460697 269 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 AL136038.1-201ENST00000497246 351 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH17O14917 CYCSP22-201ENST00000517555 339 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AC027308.1-201ENST00000517993 110 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH17O14917 AC078899.1-201ENST00000521432 1185 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AC112191.2-201ENST00000522428 333 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDH17O14917 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH17O14917 AC008083.2-201ENST00000546707 476 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH17O14917 AC006530.1-201ENST00000555980 571 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH17O14917 AC007225.2-201ENST00000562529 256 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH17O14917 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDH17O14917 SNORD95-201ENST00000579879 68 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 MTCO2P2-201ENST00000591258 225 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH17O14917 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH17O14917 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDH17O14917 RN7SL787P-201ENST00000613000 284 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AL355974.3-201ENST00000617383 467 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 AP005431.1-201ENST00000618479 319 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
PCDH17O14917 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH17O14917 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 PARP4P2-201ENST00000446672 3326 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH17O14917 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 MAPK10-338ENST00000641647 3362 ntBASIC5.52□□□□□ -1.53
PCDH17O14917 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH17O14917 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH17O14917 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH17O14917 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH17O14917 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDH17O14917 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PCDH17O14917 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH17O14917 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH17O14917 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDH17O14917 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDH17O14917 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
PCDH17O14917 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH17O14917 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH17O14917 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH17O14917 MIR133A2-201ENST00000347538 102 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH17O14917 U6.112-201ENST00000384129 70 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 RNU6-932P-201ENST00000391108 106 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 EI24P3-201ENST00000399046 1062 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.51□□□□□ -1.53
PCDH17O14917 RPL7P27-201ENST00000403775 720 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 HMGB3P31-201ENST00000413333 595 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 VTA1P1-201ENST00000414044 866 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH17O14917 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH17O14917 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH17O14917 AC000041.1-201ENST00000439655 175 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDH17O14917 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.51□□□□□ -1.53
PCDH17O14917 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.51□□□□□ -1.53
PCDH17O14917 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH17O14917 LRRC37A14P-201ENST00000452297 462 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 RSU1P1-201ENST00000453416 441 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 RNU1-88P-201ENST00000459274 128 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.51□□□□□ -1.53
PCDH17O14917 AC090602.1-201ENST00000469695 252 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH17O14917 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PCDH17O14917 PFN1P6-201ENST00000476786 399 ntBASIC5.51□□□□□ -1.53
PCDH17O14917 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms