Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CCDC188H7C350 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CCDC188H7C350 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC188H7C350 AC104260.2-201ENST00000623551 3497 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC188H7C350 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC188H7C350 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CCDC188H7C350 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC188H7C350 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC188H7C350 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC188H7C350 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CCDC188H7C350 AL136131.1-201ENST00000406079 803 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 MIR1282-201ENST00000408865 101 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 OR6E1P-201ENST00000414424 923 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC188H7C350 TMBIM7P-201ENST00000418074 855 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC188H7C350 AL606490.7-201ENST00000433136 191 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC188H7C350 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC188H7C350 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC188H7C350 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC188H7C350 AC016724.1-201ENST00000453215 421 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC188H7C350 TPRKBP1-201ENST00000456243 481 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 AC021205.1-201ENST00000468797 348 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 PFN1P8-201ENST00000497012 543 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC188H7C350 HMGB1P40-201ENST00000525121 540 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CCDC188H7C350 AC087888.1-201ENST00000550884 1254 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 AL512310.9-201ENST00000553311 948 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC188H7C350 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC188H7C350 MIMT1-201ENST00000597105 1050 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC188H7C350 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC188H7C350 AC092159.4-201ENST00000624944 550 ntBASIC5.35□□□□□ -1.55
CCDC188H7C350 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC188H7C350 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC188H7C350 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC188H7C350 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC188H7C350 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CCDC188H7C350 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CCDC188H7C350 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CCDC188H7C350 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC188H7C350 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC188H7C350 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC188H7C350 MTCO1P15-201ENST00000529569 1526 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC188H7C350 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC188H7C350 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC188H7C350 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CCDC188H7C350 AL589826.1-201ENST00000340697 249 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC188H7C350 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC188H7C350 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC188H7C350 RNA5SP122-201ENST00000384457 108 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC188H7C350 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
CCDC188H7C350 AC006065.1-201ENST00000422539 802 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 TNPO1P1-201ENST00000423641 1138 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 MRPS33P4-201ENST00000434892 317 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 AC093716.1-201ENST00000435923 377 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 RPS29P10-201ENST00000439197 166 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC188H7C350 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 AP002884.1-201ENST00000479691 655 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC188H7C350 AC098799.1-201ENST00000504752 800 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC188H7C350 AC073358.1-201ENST00000505671 684 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 RNA5SP373-201ENST00000517271 95 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 AC012400.1-201ENST00000518452 381 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 AC087272.1-201ENST00000523624 533 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC188H7C350 AC015720.2-201ENST00000567709 334 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC188H7C350 AL133247.2-201ENST00000603236 482 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 AL499605.1-201ENST00000604628 403 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 AL021368.1-201ENST00000607490 540 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 MIR6861-201ENST00000618657 64 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC188H7C350 AC074101.1-201ENST00000637861 241 ntBASIC5.34□□□□□ -1.55
CCDC188H7C350 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.34□□□□□ -1.55
CCDC188H7C350 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.34□□□□□ -1.56
CCDC188H7C350 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CCDC188H7C350 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.34□□□□□ -1.56
CCDC188H7C350 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms