Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 RNU1-94P-201ENST00000362627 173 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 MIR191-201ENST00000384873 92 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC005522.1-201ENST00000395416 346 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AL034403.1-201ENST00000399414 885 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AL607077.1-201ENST00000401718 499 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AL035079.1-201ENST00000405210 287 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 Z82198.3-201ENST00000421145 199 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC004980.3-201ENST00000447046 365 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 LDHBP2-201ENST00000456969 1005 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC073358.1-201ENST00000505671 684 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 NACAP5-201ENST00000509863 636 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 RNA5SP249-201ENST00000516127 99 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 RNA5SP438-201ENST00000516561 112 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 DPPA2P4-201ENST00000563717 878 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC012616.1-201ENST00000600294 197 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC019131.2-201ENST00000609071 870 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AL158196.1-201ENST00000616786 434 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 AC079298.2-201ENST00000623885 459 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 CASC19-274ENST00000642018 970 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 DDX18P4-201ENST00000511690 1966 ntBASIC4.34□□□□□ -1.71
KCNIP3Q9Y2W7 SRRM1P3-201ENST00000426911 2678 ntBASIC4.34□□□□□ -1.72
KCNIP3Q9Y2W7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
KCNIP3Q9Y2W7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KCNIP3Q9Y2W7 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KCNIP3Q9Y2W7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC091046.3-201ENST00000631455 1574 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 RNU6-618P-201ENST00000363518 112 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AL034417.1-201ENST00000399343 800 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AL121834.1-202ENST00000404494 277 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AL390316.1-201ENST00000406279 553 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AL139039.2-201ENST00000407436 479 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 RN7SKP86-201ENST00000410454 332 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 Z93019.1-201ENST00000416450 973 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 RPL36AP10-201ENST00000421785 322 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 RPL23AP4-201ENST00000427757 463 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 COX6CP13-201ENST00000428703 226 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 MTCO1P45-201ENST00000431457 267 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 GSTM5P1-201ENST00000434751 660 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 CLUHP1-201ENST00000435012 1190 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 GAPDHP25-201ENST00000447061 1001 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 PTMAP3-201ENST00000447474 330 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 BTF3P6-201ENST00000448054 499 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AL157884.3-201ENST00000448273 1184 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 LRRC37A14P-201ENST00000452297 462 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 EIF2S2P5-201ENST00000457635 968 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 RN7SL447P-201ENST00000494711 245 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC011411.1-201ENST00000509592 876 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC006427.1-201ENST00000514359 712 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 Y_RNA.667-201ENST00000516212 107 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 OR8X1P-201ENST00000534542 869 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 RBM22P12-201ENST00000567098 1255 ntBASIC4.33□□□□□ -1.72
KCNIP3Q9Y2W7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms