Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC104982.1-201ENST00000478775 574 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC090638.1-201ENST00000498296 909 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC138409.2-202ENST00000507274 458 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC105384.2-201ENST00000508433 640 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC112518.2-201ENST00000508565 425 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 ST13P12-201ENST00000508958 1094 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC008147.3-201ENST00000548666 354 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 GLRXP2-201ENST00000555594 321 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC044860.2-201ENST00000561005 179 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 NANOGP3-201ENST00000605855 286 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AL356863.1-201ENST00000623378 1080 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 AP004607.3-201ENST00000530354 3915 ntBASIC6.05□□□□□ -1.44
SSX2IPQ9Y2D8 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 MIR551A-201ENST00000385042 96 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AF228730.1-201ENST00000397972 663 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 RPS27AP6-201ENST00000427962 448 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 CLUHP1-201ENST00000435012 1190 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC073410.1-201ENST00000435125 589 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 MEMO1P4-201ENST00000453590 386 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 RN7SL172P-201ENST00000460535 303 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC104164.3-201ENST00000467363 1258 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC020898.1-201ENST00000474167 787 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC105233.1-201ENST00000498840 781 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 OR5M14P-201ENST00000506803 618 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC121161.1-201ENST00000510606 652 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC111000.6-201ENST00000514471 709 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 NOP56P3-201ENST00000549457 385 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 QTRT1P1-201ENST00000604344 1078 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC004241.3-201ENST00000611728 517 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AL359513.1-201ENST00000614364 557 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AL590396.4-201ENST00000636779 956 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 CASC19-222ENST00000641321 1173 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC019072.1-201ENST00000604535 1551 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC053481.2-202ENST00000582394 1500 ntBASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SSX2IPQ9Y2D8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms