Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 TTC39DP-201ENST00000416781 1688 ntBASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 RN7SKP114-201ENST00000410327 279 ntBASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 CTSL3P-202ENST00000412179 788 ntBASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AC012512.1-201ENST00000446594 718 ntBASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AC069304.1-201ENST00000491593 704 ntBASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AP000676.2-201ENST00000529711 301 ntBASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AC015849.6-201ENST00000605454 474 ntBASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 AL137246.1-201ENST00000607072 977 ntBASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 EIF3FP1-201ENST00000613970 806 ntBASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CLIP2Q9UDT6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AL731532.2-201ENST00000623542 1953 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC093909.5-201ENST00000621839 1799 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 RNU1-74P-201ENST00000384108 171 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 RNU2-22P-201ENST00000411266 212 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 RPL35AP28-201ENST00000459730 331 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 OR11I1P-201ENST00000486033 954 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 RPS12P31-201ENST00000491419 398 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 RPS24P16-201ENST00000497294 392 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 OR5AZ1P-201ENST00000527448 943 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 EIF4EP5-201ENST00000528228 640 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 Mico1.1-201ENST00000611698 204 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 AC011503.2-201ENST00000594230 1500 ntBASIC6.04□□□□□ -1.44
CLIP2Q9UDT6 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 NXF4-202ENST00000416098 1465 ntBASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 RN7SKP104-201ENST00000362605 328 ntBASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 RPL37AP8-201ENST00000494116 276 ntBASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 AC011840.5-201ENST00000582125 771 ntBASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 AL627230.1-201ENST00000613077 211 ntBASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 AL591926.8-201ENST00000616876 211 ntBASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 AL445528.2-201ENST00000620582 470 ntBASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CLIP2Q9UDT6 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms