Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL356752.1-201ENST00000615844 593 ntBASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.56□□□□□ -1.68
CLCF1Q9UBD9 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AC007996.1-201ENST00000620414 2821 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 SMG1P4-204ENST00000523028 4131 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AP001029.2-203ENST00000589795 4910 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 RN7SKP113-201ENST00000363891 295 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 SNORA51.8-201ENST00000384234 132 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 RNA5SP241-201ENST00000391326 114 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 NPM1P18-201ENST00000434232 732 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AL354714.3-201ENST00000447284 493 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 SEPT14P1-201ENST00000458703 648 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 RN7SL290P-201ENST00000578661 300 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AC105254.2-201ENST00000603636 436 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 BNIP3P35-201ENST00000604530 490 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AC116651.1-201ENST00000609724 556 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AP001784.1-201ENST00000624107 428 ntBASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CLCF1Q9UBD9 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC116158.1-201ENST00000560231 2129 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 MTHFD2P5-201ENST00000320415 844 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 RN7SKP95-201ENST00000362860 303 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 RNA5SP428-201ENST00000365129 132 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AL353625.1-202ENST00000366273 571 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 OR1L6-202ENST00000373684 1044 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 SNORA66-201ENST00000384792 133 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC007068.1-201ENST00000396690 844 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC009238.2-201ENST00000431026 355 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 BX323845.1-201ENST00000432417 179 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 BX842559.2-201ENST00000451418 605 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 RN7SL443P-201ENST00000464331 290 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC105420.1-201ENST00000504389 582 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC113398.2-201ENST00000507630 558 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 RNA5SP43-201ENST00000516559 110 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 NMNAT1P1-201ENST00000554095 876 ntBASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.54□□□□□ -1.68
CLCF1Q9UBD9 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms