Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC092435.4-201ENST00000623012 4159 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC005294.1-201ENST00000355509 281 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 MIR375-201ENST00000362103 64 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 BMS1P3-201ENST00000372011 932 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC093719.1-202ENST00000392735 373 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC005522.1-201ENST00000395416 346 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 OOSP1-201ENST00000398992 1270 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 ST13P16-201ENST00000401760 781 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 HMGB1P20-201ENST00000402555 677 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AL035079.1-201ENST00000405210 287 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AL139039.2-201ENST00000407436 479 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 RN7SKP16-201ENST00000410180 299 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC245060.4-201ENST00000413293 1121 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 NAP1L4P2-201ENST00000425958 899 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 Z85994.2-201ENST00000434327 452 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 CACYBPP1-201ENST00000438592 684 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 TIMM8BP2-201ENST00000445940 251 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 NOP56P2-201ENST00000447491 769 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 BTF3P6-201ENST00000448054 499 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC112206.1-201ENST00000468416 477 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC025458.1-201ENST00000506046 166 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 RNA5SP249-201ENST00000516127 99 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 RN7SKP99-201ENST00000517028 307 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 CASP1P2-201ENST00000526830 1258 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 RAB30-209ENST00000532548 644 ntTSL 3 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 EIF1AXP2-201ENST00000555940 413 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 RBM22P12-201ENST00000567098 1255 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC092121.1-201ENST00000569452 202 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC005341.1-201ENST00000571086 708 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 RN7SL708P-201ENST00000580952 299 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC009303.3-201ENST00000591103 736 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC012616.1-201ENST00000600294 197 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC005479.3-201ENST00000602790 431 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC009597.2-201ENST00000604659 592 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 MIR8069-1-201ENST00000616627 86 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 MIR8069-2-201ENST00000621412 86 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC129915.3-201ENST00000634128 948 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC027290.2-201ENST00000623210 18662 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC090971.4-201ENST00000560291 1800 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 AC104118.1-201ENST00000607625 1589 ntBASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SND1-IT1Q9HBX3 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 AC006210.2-201ENST00000367074 1545 ntBASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 RNU6-618P-201ENST00000363518 112 ntBASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 RNA5SP394-201ENST00000364216 119 ntBASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 RNU4-2-201ENST00000365668 141 ntBASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 HSPA8P15-201ENST00000401676 786 ntBASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 AL390316.1-201ENST00000406279 553 ntBASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 RN7SKP247-201ENST00000411094 308 ntBASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 EIF4A1P1-201ENST00000420241 934 ntBASIC3.45□□□□□ -1.86
SND1-IT1Q9HBX3 AL590609.2-201ENST00000421430 368 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms