Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC107398.1-201ENST00000486904 505 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC138853.1-201ENST00000503549 823 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC037479.1-201ENST00000558361 625 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 SYPL1P2-201ENST00000582878 727 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC026368.1-201ENST00000614934 690 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AF001550.2-201ENST00000636643 217 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 OR11H2-202ENST00000641517 1085 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC078880.4-201ENST00000617627 1749 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AL137100.1-201ENST00000556703 1620 ntBASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.7□□□□□ -1.5
SEC61A2Q9H9S3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 RNA5SP27-201ENST00000363839 119 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 RNA5SP478-201ENST00000364657 115 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AP003170.5-201ENST00000397185 335 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AL079342.2-201ENST00000403367 482 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 RPS3AP24-201ENST00000407896 734 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 MIR548F1-201ENST00000408667 84 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 RN7SKP129-201ENST00000410288 299 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 RN7SKP221-201ENST00000410420 301 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 MRPS21P5-201ENST00000417885 231 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 EIF1P1-201ENST00000421436 341 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC104651.1-201ENST00000427559 735 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 RPL23AP76-201ENST00000441860 458 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC234771.2-201ENST00000445718 597 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AL445991.1-201ENST00000450381 475 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC002075.1-201ENST00000457396 676 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 RPL7P1-201ENST00000468161 747 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 RPL7P9-201ENST00000468715 747 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC037198.2-201ENST00000478845 733 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 HSPE1P23-201ENST00000509838 286 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 GUSBP9-201ENST00000510138 584 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AC106800.3-201ENST00000511389 308 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 IGKV1D-22-201ENST00000518953 324 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 AP005639.1-201ENST00000526939 192 ntBASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.69□□□□□ -1.5
SEC61A2Q9H9S3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms