Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 MFSD13B-201ENST00000420133 1290 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC090960.1-201ENST00000421072 306 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC108479.1-201ENST00000431142 427 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 VN1R108P-201ENST00000431580 830 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 NPM1P18-201ENST00000434232 732 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 LYPLA1P1-201ENST00000434514 622 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 RPL5P7-201ENST00000444235 813 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AL590004.3-202ENST00000445883 451 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 OR51B8P-201ENST00000449892 769 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC009963.3-201ENST00000458090 486 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AL603882.1-201ENST00000463059 681 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC023050.1-201ENST00000498198 304 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC092593.2-201ENST00000513866 913 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 OR4A2P-201ENST00000527276 913 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC090424.1-201ENST00000535243 736 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC006518.2-201ENST00000542513 940 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AL049870.4-201ENST00000555741 486 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC124856.1-201ENST00000600819 896 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC025165.5-201ENST00000602802 578 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC067773.1-201ENST00000603284 1094 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC002069.2-201ENST00000603580 883 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC018618.2-201ENST00000604770 446 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 RPSAP75-201ENST00000605848 301 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AL133481.2-203ENST00000607558 139 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC007349.4-201ENST00000608114 532 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AL121890.3-201ENST00000618494 516 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC005618.4-201ENST00000625053 554 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC012078.1-201ENST00000405035 1646 ntBASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.51□□□□□ -1.53
AMBRA1Q9C0C7 AC004656.1-201ENST00000568479 4951 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC130360.2-201ENST00000533477 1556 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 MTCO1P18-201ENST00000455518 1419 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC092111.2-201ENST00000611627 1414 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC004158.1-201ENST00000564508 4319 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 RN7SKP185-201ENST00000362813 326 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 SNORA51.1-201ENST00000363243 140 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 RNU4-51P-201ENST00000364206 140 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 SNORD116-1-201ENST00000384335 95 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 RN7SKP279-201ENST00000411383 298 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC010385.1-201ENST00000412374 256 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AL356320.2-201ENST00000417263 507 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 RPL35AP31-201ENST00000418340 337 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 NMD3P2-201ENST00000421815 761 ntBASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
AMBRA1Q9C0C7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms