Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL157385.1-201ENST00000446973 268 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AL672167.3-201ENST00000465951 960 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AL671862.1-201ENST00000515851 349 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 LSM3P2-201ENST00000551246 273 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 OR11J2P-201ENST00000555298 907 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AC009852.2-201ENST00000567898 485 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AP000648.2-201ENST00000624182 404 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AC026523.2-201ENST00000625039 7739 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 MUC2-202ENST00000613187 4845 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 TCP11X1-202ENST00000622971 1372 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 AC003985.2-201ENST00000562268 1669 ntBASIC6.04□□□□□ -1.44
UPF3BQ9BZI7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 RPL23P2-201ENST00000320371 421 ntBASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 DUTP5-201ENST00000406790 469 ntBASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 SNORA11-201ENST00000408789 128 ntBASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 AC011840.5-201ENST00000582125 771 ntBASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 AP002505.2-201ENST00000623585 696 ntBASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 PANDAR-201ENST00000629595 1506 ntBASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 HSPA8P18-201ENST00000439846 1928 ntBASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
UPF3BQ9BZI7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
UPF3BQ9BZI7 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AL672167.1-204ENST00000641875 3017 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AC013429.2-201ENST00000418798 781 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 OR52B5P-201ENST00000435337 951 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 TXNP5-201ENST00000441043 315 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AC073648.4-201ENST00000442655 781 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 RN7SL443P-201ENST00000464331 290 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AC109462.1-201ENST00000491087 368 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AC105031.1-201ENST00000518550 476 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AC024940.3-201ENST00000538551 316 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 OR1F2P-201ENST00000570470 933 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 OR51C1P-201ENST00000608504 942 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 Z95327.3-201ENST00000610385 572 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AP002799.1-201ENST00000623552 423 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 OR52B5P-202ENST00000641118 1110 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 AC012078.1-201ENST00000405035 1646 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 HSPA8P14-201ENST00000552265 1805 ntBASIC6.02□□□□□ -1.45
UPF3BQ9BZI7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 AC093849.1-201ENST00000563631 2209 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 SNORA77-201ENST00000408716 125 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 RN7SKP114-201ENST00000410327 279 ntBASIC6.01□□□□□ -1.45
UPF3BQ9BZI7 RN7SKP126-201ENST00000411143 300 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms