Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC119744.1-201ENST00000454746 1715 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 SLC10A5P1-201ENST00000379063 1306 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
TRIM55Q9BYV6 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM55Q9BYV6 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
TRIM55Q9BYV6 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.46□□□□□ -1.37
TRIM55Q9BYV6 SHQ1P1-201ENST00000437111 1544 ntBASIC6.46□□□□□ -1.37
TRIM55Q9BYV6 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AL161909.1-201ENST00000397390 712 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AL021407.1-201ENST00000404531 386 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 RPS26P38-201ENST00000414476 348 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 DYNLL1P7-201ENST00000429273 258 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 PPIAP17-201ENST00000438507 471 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 ELOCP8-201ENST00000439309 332 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 NPM1P23-201ENST00000440193 849 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 ELOCP15-201ENST00000442090 332 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 FAR2P1-206ENST00000449736 709 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AL358876.1-201ENST00000453364 1075 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC005229.2-201ENST00000456995 399 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 RN7SL216P-201ENST00000471607 298 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 RPS26P6-201ENST00000475156 348 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC091965.3-201ENST00000506236 208 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 CYP4F27P-201ENST00000514557 494 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 Y_RNA.655-201ENST00000515919 96 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 RNU6-1225P-201ENST00000516336 65 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 IGKV2-19-201ENST00000518132 283 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 CA1-215ENST00000522389 551 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 EIF4A2P5-201ENST00000529914 499 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC006530.1-201ENST00000555980 571 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 VN1R90P-201ENST00000595717 726 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC010738.1-201ENST00000604970 987 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC135507.1-201ENST00000607214 561 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC068726.1-201ENST00000610993 341 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 MIR7109-201ENST00000613748 65 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC069209.1-201ENST00000619282 651 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AP001962.1-201ENST00000624114 559 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC217777.1-201ENST00000570034 1471 ntBASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
TRIM55Q9BYV6 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 AL606537.1-201ENST00000607258 2011 ntBASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM55Q9BYV6 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms