Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC009597.2-201ENST00000604659 592 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC114477.1-201ENST00000605097 605 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC069499.2-201ENST00000610665 382 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC092266.1-201ENST00000610958 165 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 STMN1P1-201ENST00000617809 440 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AL445670.1-201ENST00000618889 801 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 VN2R1P-201ENST00000449668 1743 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AMPD3-208ENST00000528723 2753 ntTSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 TMX2-201ENST00000278422 1631 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC027279.1-201ENST00000568885 4284 ntBASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL25A1Q9BXS0 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AL449403.2-201ENST00000624497 2662 ntTSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RUNX1T1-203ENST00000396218 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC011416.1-201ENST00000514947 1732 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 CCDC149-204ENST00000504487 3869 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 ASPH-230ENST00000541428 2550 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 ZMYND8-203ENST00000352431 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RNU6-451P-201ENST00000362921 107 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 Y_RNA.157-201ENST00000363638 102 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RN7SKP292-201ENST00000365522 317 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 SNORA22B-201ENST00000383876 138 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RNU6-1026P-201ENST00000384465 108 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 GAPDHP49-201ENST00000421421 961 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 MTCO3P46-201ENST00000425787 232 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 FABP7P2-201ENST00000429946 379 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC002486.1-201ENST00000435098 391 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RABEPKP1-201ENST00000440529 1026 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RPL36AP39-201ENST00000445859 318 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 CACYBPP2-201ENST00000453625 678 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RPL35P6-201ENST00000490024 372 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 KCTD9P5-201ENST00000504141 1170 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC010587.1-201ENST00000505809 469 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 NPM1P21-201ENST00000513394 762 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC087276.1-201ENST00000529659 480 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 OR5F2P-201ENST00000532761 941 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC137768.1-201ENST00000549998 553 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC084033.3-201ENST00000551421 451 ntTSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 LINC01974-201ENST00000575126 494 ntTSL 3 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC006270.2-201ENST00000578523 652 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 H3F3BP2-201ENST00000583907 357 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RNF138P2-201ENST00000603490 592 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC113194.1-201ENST00000606037 500 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RN7SL715P-201ENST00000606972 286 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC006924.1-201ENST00000610750 559 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RN7SL787P-201ENST00000613000 284 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 LPAL2-203ENST00000454031 2498 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 LINC01748-202ENST00000634281 2864 ntTSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AOX2P-204ENST00000487742 3284 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC104118.1-201ENST00000607625 1589 ntBASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL25A1Q9BXS0 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL25A1Q9BXS0 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms