Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SNORA43.3-201ENST00000517240 103 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC078878.1-201ENST00000539832 958 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC006512.2-201ENST00000543250 486 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 BNIP3P35-201ENST00000604530 490 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC118658.2-201ENST00000618697 459 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC007683.2-201ENST00000624681 714 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AL672167.1-205ENST00000641112 3080 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 AC090181.3-201ENST00000624777 1514 ntBASIC3.79□□□□□ -1.8
AP1S3Q96PC3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.79□□□□□ -1.8
AP1S3Q96PC3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 ODF3-202ENST00000342593 386 ntTSL 5 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 GCNT6-201ENST00000379591 934 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 RN7SKP16-201ENST00000410180 299 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 PPP2R2DP1-201ENST00000420526 637 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 RPL34P3-201ENST00000421454 338 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 FABP7P2-201ENST00000429946 379 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AC009238.2-201ENST00000431026 355 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 Z84478.1-201ENST00000438230 1219 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AL445665.1-202ENST00000452436 324 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AL121877.1-201ENST00000453704 622 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AL445433.1-201ENST00000457507 257 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 TOPORSLP1-201ENST00000467693 2102 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 B4GALNT2P1-201ENST00000508857 307 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 VWA8P1-201ENST00000510889 176 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 YWHABP2-201ENST00000540201 713 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 GNG2-208ENST00000554875 430 ntTSL 5 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AC138207.8-204ENST00000579588 527 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AC008814.1-201ENST00000603797 406 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AL162431.4-201ENST00000604674 411 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AC129915.3-201ENST00000634128 948 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
AP1S3Q96PC3 AL133268.1-201ENST00000405676 1401 ntBASIC3.78□□□□□ -1.8
AP1S3Q96PC3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
AP1S3Q96PC3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC3.78□□□□□ -1.81
AP1S3Q96PC3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
AP1S3Q96PC3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 MRRF-207ENST00000373729 870 ntTSL 3 BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 HDGFP1-201ENST00000405943 252 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 EIF4A1P3-201ENST00000411521 244 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 CEACAMP8-201ENST00000413902 580 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 EIF4EP1-201ENST00000422311 642 ntBASIC3.77□□□□□ -1.81
AP1S3Q96PC3 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
AP1S3Q96PC3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms