Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC012181.1-201ENST00000479895 423 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC104564.1-201ENST00000493028 407 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AP002812.4-201ENST00000532139 286 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC138915.2-201ENST00000569776 97 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC073539.2-201ENST00000597113 165 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AL359757.2-201ENST00000624309 274 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 AC011379.1-201ENST00000508713 3025 ntBASIC8.07□□□□□ -1.12
LRCH3Q96II8 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LRCH3Q96II8 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
LRCH3Q96II8 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 EFHC1-233ENST00000637353 3829 ntTSL 5 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 SNORA51.1-201ENST00000363243 140 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 Y_RNA.158-201ENST00000363651 101 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 SNORA10B-201ENST00000384458 133 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 MTCYBP4-201ENST00000401524 249 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 RNU4-14P-201ENST00000410858 122 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AL451054.2-201ENST00000420896 202 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 PIGX-204ENST00000421265 677 ntTSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AL669831.1-202ENST00000428504 417 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC007559.1-201ENST00000428736 355 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AL645937.3-201ENST00000453647 936 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC010307.1-201ENST00000467206 836 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC068781.1-201ENST00000488231 618 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 GAPDHP56-201ENST00000506031 988 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 SUMO2P7-201ENST00000511179 285 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 RNU6-764P-201ENST00000516396 105 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AP005902.2-201ENST00000518393 307 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 OR5D15P-201ENST00000531671 942 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 CYCSP2-201ENST00000558168 301 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 MT1CP-201ENST00000567054 174 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 MIR4428-201ENST00000584884 73 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC018462.2-201ENST00000605375 395 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC004696.1-201ENST00000614345 607 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 FAM157A-202ENST00000615155 405 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC078909.2-201ENST00000620584 398 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC024580.1-201ENST00000623020 674 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC129908.1-201ENST00000624553 648 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC016747.1-201ENST00000420918 2532 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LRCH3Q96II8 AC073342.2-201ENST00000595842 1800 ntBASIC8.06□□□□□ -1.12
LRCH3Q96II8 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
LRCH3Q96II8 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
LRCH3Q96II8 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
LRCH3Q96II8 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms