Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.19□□□□□ -1.58
VPS33AQ96AX1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC025574.1-201ENST00000554784 1653 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 SMG1P4-204ENST00000523028 4131 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 RNU6-185P-201ENST00000384421 107 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 COX5BP7-201ENST00000414780 274 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 CLIC4P1-201ENST00000453177 535 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC025459.1-201ENST00000504072 156 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC109464.1-201ENST00000511091 819 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC127381.1-201ENST00000555979 939 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC068714.1-201ENST00000559623 800 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC022884.3-201ENST00000579571 248 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC135178.6-201ENST00000605314 398 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AL391834.1-201ENST00000609609 560 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AC110792.4-201ENST00000609843 298 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 AL645927.2-201ENST00000618350 349 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.18□□□□□ -1.58
VPS33AQ96AX1 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
VPS33AQ96AX1 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC007618.1-201ENST00000366455 732 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 RPL21P67-201ENST00000402896 478 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC211486.3-201ENST00000412694 621 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC245060.4-201ENST00000413293 1121 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 MTATP6P19-201ENST00000413797 659 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC066692.1-201ENST00000421721 457 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC099336.2-201ENST00000422457 254 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 NPM1P22-201ENST00000427761 952 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 MTATP6P11-201ENST00000428071 670 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AL450023.1-201ENST00000450868 751 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AL353718.1-201ENST00000451028 517 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 PRPF38AP1-201ENST00000451976 933 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 VDAC2P4-201ENST00000452925 711 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 HLA-DPA3-207ENST00000454398 229 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC118758.1-202ENST00000454719 225 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC099560.2-201ENST00000457554 255 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 ACA64.1-201ENST00000459171 127 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AP002884.1-201ENST00000479691 655 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 SYT14P1-201ENST00000481459 721 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 MYL12BP2-201ENST00000503948 512 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 EIF3KP3-201ENST00000514461 639 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 SNORA70.20-201ENST00000516848 126 ntBASIC5.17□□□□□ -1.58
VPS33AQ96AX1 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.17□□□□□ -1.58
VPS33AQ96AX1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms