Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC6.21□□□□□ -1.42
HPS3Q969F9 RPS3AP15-201ENST00000483874 781 ntBASIC6.21□□□□□ -1.42
HPS3Q969F9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.21□□□□□ -1.42
HPS3Q969F9 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.21□□□□□ -1.42
HPS3Q969F9 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.21□□□□□ -1.42
HPS3Q969F9 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.21□□□□□ -1.42
HPS3Q969F9 AC026407.1-201ENST00000518369 204 ntBASIC6.21□□□□□ -1.42
HPS3Q969F9 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.21□□□□□ -1.42
HPS3Q969F9 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.21□□□□□ -1.42
HPS3Q969F9 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.21□□□□□ -1.42
HPS3Q969F9 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.21□□□□□ -1.42
HPS3Q969F9 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.21□□□□□ -1.42
HPS3Q969F9 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.21□□□□□ -1.42
HPS3Q969F9 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.21□□□□□ -1.42
HPS3Q969F9 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.21□□□□□ -1.42
HPS3Q969F9 AL135786.2-201ENST00000608422 615 ntBASIC6.21□□□□□ -1.42
HPS3Q969F9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HPS3Q969F9 AC022079.2-201ENST00000619739 566 ntBASIC6.21□□□□□ -1.42
HPS3Q969F9 AC024023.1-201ENST00000624530 922 ntBASIC6.21□□□□□ -1.42
HPS3Q969F9 MIR193BHG-214ENST00000641765 509 ntBASIC6.21□□□□□ -1.42
HPS3Q969F9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HPS3Q969F9 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HPS3Q969F9 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.21□□□□□ -1.42
HPS3Q969F9 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HPS3Q969F9 AC020656.2-201ENST00000613291 5309 ntBASIC6.21□□□□□ -1.42
HPS3Q969F9 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.21□□□□□ -1.42
HPS3Q969F9 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HPS3Q969F9 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HPS3Q969F9 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AC009962.1-201ENST00000567327 3813 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
HPS3Q969F9 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.2□□□□□ -1.42
HPS3Q969F9 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HPS3Q969F9 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AC003973.3-201ENST00000624863 2822 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HPS3Q969F9 RN7SKP185-201ENST00000362813 326 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
HPS3Q969F9 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.2□□□□□ -1.42
HPS3Q969F9 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.2□□□□□ -1.42
HPS3Q969F9 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.2□□□□□ -1.42
HPS3Q969F9 OR10T1P-201ENST00000424327 947 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.2□□□□□ -1.42
HPS3Q969F9 ETF1P3-201ENST00000430422 1160 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC6.2□□□□□ -1.42
HPS3Q969F9 TMEM183AP1-205ENST00000432739 290 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC6.2□□□□□ -1.42
HPS3Q969F9 NANOGP9-201ENST00000439890 892 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 AC097499.1-201ENST00000444277 208 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.2□□□□□ -1.42
HPS3Q969F9 EEF1B2P6-201ENST00000445713 673 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 EXOSC3P1-201ENST00000448649 500 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 AC008280.2-201ENST00000455473 307 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 SETP20-201ENST00000457046 852 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.2□□□□□ -1.42
HPS3Q969F9 RN7SL583P-201ENST00000475692 287 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 RN7SL214P-201ENST00000487317 265 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AC098862.1-201ENST00000504991 413 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC6.2□□□□□ -1.42
HPS3Q969F9 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.2□□□□□ -1.42
HPS3Q969F9 SCARNA21.2-201ENST00000516600 166 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 AC122688.1-201ENST00000541494 223 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 AC084824.2-201ENST00000548906 345 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AC012254.4-201ENST00000588843 273 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.2□□□□□ -1.42
HPS3Q969F9 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.2□□□□□ -1.42
HPS3Q969F9 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AL390318.1-201ENST00000624564 687 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 AC010266.2-201ENST00000564741 3255 ntBASIC6.2□□□□□ -1.42
HPS3Q969F9 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HPS3Q969F9 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
HPS3Q969F9 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HPS3Q969F9 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HPS3Q969F9 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.19□□□□□ -1.42
HPS3Q969F9 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
HPS3Q969F9 AC114786.1-201ENST00000512892 1415 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.19□□□□□ -1.42
HPS3Q969F9 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
HPS3Q969F9 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.19□□□□□ -1.42
HPS3Q969F9 RNA5SP510-201ENST00000364697 99 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 RN7SKP292-201ENST00000365522 317 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HPS3Q969F9 RNU6-1320P-201ENST00000390838 107 ntBASIC6.19□□□□□ -1.42
HPS3Q969F9 RNU6-1269P-201ENST00000391139 107 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms