Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AL596275.2-208ENST00000641192 594 ntBASIC8.1□□□□□ -1.11
TOPBP1Q92547 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
TOPBP1Q92547 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
TOPBP1Q92547 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TOPBP1Q92547 PTER-201ENST00000298942 3448 ntTSL 5 BASIC8.1□□□□□ -1.11
TOPBP1Q92547 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
TOPBP1Q92547 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
TOPBP1Q92547 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC8.1□□□□□ -1.11
TOPBP1Q92547 CASC19-255ENST00000641733 1385 ntBASIC8.09□□□□□ -1.11
TOPBP1Q92547 RNU1-82P-201ENST00000390851 165 ntBASIC8.09□□□□□ -1.11
TOPBP1Q92547 AL445189.1-201ENST00000405722 338 ntBASIC8.09□□□□□ -1.11
TOPBP1Q92547 COX6CP13-201ENST00000428703 226 ntBASIC8.09□□□□□ -1.11
TOPBP1Q92547 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC8.09□□□□□ -1.11
TOPBP1Q92547 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TOPBP1Q92547 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC8.09□□□□□ -1.11
TOPBP1Q92547 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TOPBP1Q92547 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.09□□□□□ -1.11
TOPBP1Q92547 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC8.09□□□□□ -1.11
TOPBP1Q92547 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
TOPBP1Q92547 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC8.09□□□□□ -1.11
TOPBP1Q92547 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC8.09□□□□□ -1.11
TOPBP1Q92547 AL591034.3-201ENST00000605511 685 ntBASIC8.09□□□□□ -1.11
TOPBP1Q92547 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC8.09□□□□□ -1.11
TOPBP1Q92547 AC034229.5-201ENST00000624258 185 ntBASIC8.09□□□□□ -1.11
TOPBP1Q92547 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC8.09□□□□□ -1.11
TOPBP1Q92547 AC107980.1-201ENST00000558671 3355 ntBASIC8.09□□□□□ -1.11
TOPBP1Q92547 STX3-208ENST00000641815 3236 ntBASIC8.09□□□□□ -1.11
TOPBP1Q92547 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TOPBP1Q92547 TLK1P1-201ENST00000456760 2440 ntBASIC8.09□□□□□ -1.11
TOPBP1Q92547 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
TOPBP1Q92547 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
TOPBP1Q92547 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
TOPBP1Q92547 AL117378.2-201ENST00000622916 1337 ntBASIC8.09□□□□□ -1.12
TOPBP1Q92547 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 RN7SKP145-201ENST00000363291 303 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 RNA5SP317-201ENST00000410176 116 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 RNA5SP311-201ENST00000411290 116 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 RNA5SP315-201ENST00000516340 116 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 RNA5SP312-201ENST00000517068 116 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOPBP1Q92547 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TOPBP1Q92547 ZFRP1-201ENST00000457579 2970 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOPBP1Q92547 OR14L1P-202ENST00000641545 3009 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOPBP1Q92547 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOPBP1Q92547 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 RPS12P10-201ENST00000427031 377 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 Z95327.1-201ENST00000446082 482 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TOPBP1Q92547 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 NDUFB4P11-201ENST00000560510 395 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 AC116553.2-201ENST00000564203 463 ntBASIC8.08□□□□□ -1.12
TOPBP1Q92547 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC8.08□□□□□ -1.12
TOPBP1Q92547 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
TOPBP1Q92547 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOPBP1Q92547 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TOPBP1Q92547 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
TOPBP1Q92547 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TOPBP1Q92547 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC8.07□□□□□ -1.12
TOPBP1Q92547 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TOPBP1Q92547 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.07□□□□□ -1.12
TOPBP1Q92547 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC8.07□□□□□ -1.12
TOPBP1Q92547 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC8.07□□□□□ -1.12
TOPBP1Q92547 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
TOPBP1Q92547 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TOPBP1Q92547 AL451062.2-201ENST00000427515 271 ntBASIC8.07□□□□□ -1.12
TOPBP1Q92547 AC114755.5-201ENST00000447760 831 ntBASIC8.07□□□□□ -1.12
TOPBP1Q92547 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC8.07□□□□□ -1.12
TOPBP1Q92547 AC006130.2-201ENST00000586202 326 ntBASIC8.07□□□□□ -1.12
TOPBP1Q92547 AC011477.5-201ENST00000586571 259 ntBASIC8.07□□□□□ -1.12
TOPBP1Q92547 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC8.07□□□□□ -1.12
TOPBP1Q92547 AC090948.2-201ENST00000607363 564 ntBASIC8.07□□□□□ -1.12
TOPBP1Q92547 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
TOPBP1Q92547 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
TOPBP1Q92547 CARF-208ENST00000428585 2513 ntTSL 2 BASIC8.06□□□□□ -1.12
TOPBP1Q92547 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
TOPBP1Q92547 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
TOPBP1Q92547 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TOPBP1Q92547 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
TOPBP1Q92547 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC8.06□□□□□ -1.12
TOPBP1Q92547 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8.06□□□□□ -1.12
TOPBP1Q92547 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TOPBP1Q92547 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC8.06□□□□□ -1.12
TOPBP1Q92547 RNA5SP44-201ENST00000410446 133 ntBASIC8.06□□□□□ -1.12
TOPBP1Q92547 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms