Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 RNU6-906P-201ENST00000384700 70 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 RNU6-316P-201ENST00000391027 107 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 RNU2-18P-201ENST00000411224 162 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC245060.4-201ENST00000413293 1121 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 OSTCP5-201ENST00000425293 453 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC092648.1-201ENST00000425870 423 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 OR10R1P-201ENST00000441524 1141 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC122718.2-201ENST00000505325 591 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC006499.4-201ENST00000510947 694 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC021193.1-201ENST00000511607 420 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AP004609.2-201ENST00000532177 190 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 CYB5AP5-201ENST00000549779 389 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 OR4U1P-201ENST00000554958 912 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC113368.1-201ENST00000603736 382 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC073387.2-201ENST00000604797 784 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AP005431.1-201ENST00000618479 319 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AL035461.2-201ENST00000619201 524 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC011330.2-201ENST00000621680 635 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AL390318.1-201ENST00000624564 687 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC087565.3-203ENST00000641018 837 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AL034549.2-201ENST00000618285 3373 ntBASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ATG4AQ8WYN0 AL353796.1-201ENST00000561542 3241 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC083837.1-201ENST00000565297 2994 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 MTHFD2P5-201ENST00000320415 844 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 SNORD56.4-201ENST00000363883 71 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 RNU6-1005P-201ENST00000384519 107 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 OR7E101P-201ENST00000400428 513 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 HMGB1P20-201ENST00000402555 677 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC107081.1-201ENST00000414975 361 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 PNRC2P1-201ENST00000423940 420 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AL590399.4-201ENST00000436561 601 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 RPL5P25-201ENST00000441148 775 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 VN1R25P-201ENST00000443385 738 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AL353898.1-201ENST00000444055 238 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 Z83846.1-201ENST00000446798 265 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC092155.2-201ENST00000454675 477 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 ACA64.1-201ENST00000459171 127 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC087672.1-201ENST00000479876 766 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 MTCO3P35-201ENST00000485582 781 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 MTND4LP2-201ENST00000502312 285 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 SNORA70.20-201ENST00000516848 126 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC091515.1-201ENST00000548110 679 ntBASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.7□□□□□ -1.5
ATG4AQ8WYN0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms