Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AP001962.1-201ENST00000624114 559 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC005332.5-201ENST00000591222 2919 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AL592182.3-201ENST00000642132 3304 ntBASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CCDC71LQ8N9Z2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 RNA5SP394-201ENST00000364216 119 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AC244453.4-201ENST00000419150 388 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 COX6CP13-201ENST00000428703 226 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 BTF3P6-201ENST00000448054 499 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AL035090.1-201ENST00000454835 332 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 CYCSP34-201ENST00000458172 304 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AC022336.1-201ENST00000475510 337 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AC044810.1-201ENST00000480271 711 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 RN7SL447P-201ENST00000494711 245 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 RNA5SP360-201ENST00000516555 118 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 SNORA43.3-201ENST00000517240 103 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 YWHABP2-201ENST00000540201 713 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AC079600.1-201ENST00000550326 297 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 BNIP3P35-201ENST00000604530 490 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AC015871.5-202ENST00000623252 701 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 OR51H2P-202ENST00000641424 3046 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 VPS35P1-201ENST00000563400 1518 ntBASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.31□□□□□ -1.72
CCDC71LQ8N9Z2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 MIR105-1-201ENST00000385222 81 ntBASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AC007064.3-201ENST00000422608 359 ntBASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AC099063.2-201ENST00000446360 662 ntBASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AC004980.3-201ENST00000447046 365 ntBASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AP006222.1-205ENST00000450734 457 ntBASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 RNA5SP249-201ENST00000516127 99 ntBASIC4.3□□□□□ -1.72
CCDC71LQ8N9Z2 AC027308.1-201ENST00000517993 110 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms