Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AL606537.1-201ENST00000607258 2011 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 MAPK10-320ENST00000641462 6696 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 AL672167.2-201ENST00000377164 879 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 RNA5SP339-201ENST00000390987 122 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 RAB5CP1-201ENST00000395972 580 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 MIR1182-201ENST00000408363 97 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 SLC35E1P1-201ENST00000419313 864 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 AL133325.1-201ENST00000421090 382 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 FAM96AP1-201ENST00000430879 482 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 NFYAP1-201ENST00000431953 972 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 OR6C71P-201ENST00000432580 913 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 RBMY2TP-201ENST00000451162 947 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 RPL7P45-201ENST00000455851 743 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 RN7SL515P-201ENST00000463999 297 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 AC100832.1-201ENST00000471945 383 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 RPL7AP10-201ENST00000481016 791 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 EIF1P7-201ENST00000487533 337 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 RN7SL346P-201ENST00000491561 294 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 RPEP1-201ENST00000504507 658 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 AC005726.4-201ENST00000582858 458 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 FO393422.1-201ENST00000603908 708 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 CYP4F35P-202ENST00000636121 390 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 OR8A1-204ENST00000642111 1145 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 CASC19-206ENST00000641028 1430 ntBASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.97□□□□□ -1.61
NUDCD3Q8IVD9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
NUDCD3Q8IVD9 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
NUDCD3Q8IVD9 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 RN7SKP292-201ENST00000365522 317 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 MIR600-201ENST00000385007 98 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 RNU1-77P-201ENST00000390868 162 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 LRRC37BP1-201ENST00000398851 714 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 CDY17P-201ENST00000414121 1282 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 RPS3P2-201ENST00000421346 701 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 CKS1BP6-201ENST00000424932 240 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 FABP7P2-201ENST00000429946 379 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 BTG3P1-201ENST00000435859 716 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC012075.1-201ENST00000436549 580 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AL138899.2-201ENST00000439139 499 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC073052.1-201ENST00000440417 714 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC064862.4-201ENST00000442180 334 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 RPL36AP39-201ENST00000445859 318 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 RHEBP2-201ENST00000450289 600 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC002553.2-201ENST00000453217 340 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 HMGB1P4-201ENST00000455362 567 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 RN7SL799P-201ENST00000475891 298 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 RPL7P6-201ENST00000480903 738 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 RPS4XP20-201ENST00000505751 772 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC135626.1-201ENST00000556983 435 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 NDUFA5P11-201ENST00000567995 343 ntBASIC4.96□□□□□ -1.62
NUDCD3Q8IVD9 ADAM3B-201ENST00000569937 840 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms