Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 RPS27P23-201ENST00000487608 251 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 RN7SKP31-201ENST00000516354 278 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 HIGD1AP6-201ENST00000521833 279 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC234778.2-201ENST00000566241 354 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AL121834.1-201ENST00000572284 509 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 RN7SL753P-201ENST00000581238 290 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 MIR3611-201ENST00000584484 83 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC073648.5-201ENST00000603502 305 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AC073488.6-201ENST00000632293 754 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
NPAS4Q8IUM7 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 RPS26P38-201ENST00000414476 348 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC234782.4-201ENST00000417646 1048 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 IPPKP1-201ENST00000422501 768 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 DNAJA1P6-201ENST00000437347 354 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 CXCR2P1-202ENST00000443392 1074 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC116337.2-201ENST00000477662 156 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 LTV1P1-201ENST00000510683 1237 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 RNU6-885P-201ENST00000516607 104 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 NANOGNBP2-201ENST00000544753 553 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AL133241.1-201ENST00000556832 487 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC093519.1-201ENST00000566109 298 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC006362.1-201ENST00000567392 174 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AL451049.1-201ENST00000608672 497 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AP001437.1-201ENST00000608783 456 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 AC135068.5-201ENST00000624197 983 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 SAMMSON-209ENST00000641222 1100 ntBASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NPAS4Q8IUM7 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms