Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 AL356095.1-201ENST00000417217 199 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 SCAND3P1-201ENST00000439854 1060 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 AC108475.1-201ENST00000507880 950 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 BX005214.3-202ENST00000619809 325 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 AP003400.2-201ENST00000624036 666 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 AC004777.1-201ENST00000624317 287 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 AL139254.3-201ENST00000641097 674 ntBASIC3.87□□□□□ -1.79
VPS13CQ709C8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
VPS13CQ709C8 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS13CQ709C8 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC017019.1-201ENST00000426129 261 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 FZD10-AS1-201ENST00000505807 10193 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 RPL23AP26-201ENST00000412728 464 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 TAAR4P-201ENST00000454843 1039 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 MIR8059-201ENST00000620427 81 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC005858.4-201ENST00000623191 700 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC008758.3-201ENST00000507003 1829 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 RNA5SP366-201ENST00000365454 123 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 RNA5SP283-201ENST00000365604 119 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 FAM27B-201ENST00000610601 213 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 CDRT1-208ENST00000630868 794 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 ZNF137P-201ENST00000456718 1920 ntBASIC3.86□□□□□ -1.79
VPS13CQ709C8 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS13CQ709C8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS13CQ709C8 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 CARF-208ENST00000428585 2513 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 HMGB3P5-201ENST00000428894 612 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 PGBD4P4-201ENST00000509673 613 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 MTCO1P35-201ENST00000515270 228 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 NPM1P6-201ENST00000521088 871 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VPS13CQ709C8 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 RNU1-94P-201ENST00000362627 173 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 RNU6-525P-201ENST00000363685 104 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 AP001804.1-201ENST00000526868 919 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 AC008739.3-201ENST00000603262 127 ntBASIC3.85□□□□□ -1.79
VPS13CQ709C8 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.85□□□□□ -1.79
VPS13CQ709C8 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms