Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 MIR589-201ENST00000385238 99 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 AC093716.1-201ENST00000435923 377 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 SPRYD7P1-201ENST00000443861 570 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 CYCSP24-201ENST00000445119 316 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 GAPDHP25-201ENST00000447061 1001 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 RNU6-775P-201ENST00000459318 96 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 AL133445.1-201ENST00000467051 452 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 HAUS1P1-201ENST00000505275 832 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 AC011411.1-201ENST00000509592 876 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 BX510359.5-201ENST00000515651 304 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 OR4V1P-201ENST00000525394 1140 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 AC006363.1-201ENST00000603806 463 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 AC092159.4-201ENST00000624944 550 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 AC074101.1-201ENST00000637861 241 ntBASIC4.77□□□□□ -1.65
NIPAL3Q6P499 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
NIPAL3Q6P499 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AC100778.3-201ENST00000580060 1750 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 MIR7-1-201ENST00000384871 110 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 MIR105-1-201ENST00000385222 81 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 MT-TP-201ENST00000387461 68 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 RN7SKP16-201ENST00000410180 299 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 RNA5SP487-201ENST00000410186 122 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 FAM96AP1-201ENST00000430879 482 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AC012512.1-201ENST00000446594 718 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 NPM1P19-201ENST00000450070 712 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AC079168.1-201ENST00000458741 345 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 RPEP1-201ENST00000504507 658 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 OR8X1P-201ENST00000534542 869 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AC011626.1-201ENST00000604710 562 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AL359513.1-201ENST00000614364 557 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 AL121890.2-201ENST00000617644 465 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 THAP12P5-201ENST00000405864 2275 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 MRRFP1-201ENST00000435941 1675 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 SAMMSON-213ENST00000641336 1521 ntBASIC4.76□□□□□ -1.65
NIPAL3Q6P499 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.76□□□□□ -1.65
NIPAL3Q6P499 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NIPAL3Q6P499 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms