Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 COL11A2P1-205ENST00000441798 676 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 HMGN1P2-201ENST00000445197 310 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AP000852.1-201ENST00000472460 573 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC116337.2-201ENST00000477662 156 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC092989.1-201ENST00000481235 277 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AL390198.2-201ENST00000510553 222 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AP001207.1-201ENST00000524051 481 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 TRIM51DP-201ENST00000529746 596 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 DEFB108A-201ENST00000530110 222 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC084121.1-201ENST00000533882 835 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 UBE2FP2-201ENST00000566646 462 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 ANP32BP1-202ENST00000568553 737 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC106785.4-201ENST00000569492 412 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC012175.1-201ENST00000603755 531 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC009159.1-201ENST00000618386 642 ntBASIC6.91□□□□□ -1.3
RNF43Q68DV7 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RNF43Q68DV7 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.91□□□□□ -1.3
RNF43Q68DV7 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 CBX3P1-201ENST00000325243 554 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 RNU1-87P-201ENST00000363727 170 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 RNA5SP433-201ENST00000364491 114 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 RNU4-12P-201ENST00000365233 139 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 AF228730.4-201ENST00000421457 183 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 CYCSP46-201ENST00000423569 204 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 CNOT7P1-201ENST00000429006 852 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 PPIAP20-201ENST00000449839 135 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 RPL7L1P3-201ENST00000455249 689 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 AP002884.1-201ENST00000479691 655 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 NCOR1P1-202ENST00000486162 291 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 NIPA2P2-201ENST00000496376 1083 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 NENFP3-201ENST00000503735 313 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 RNU6-314P-201ENST00000516574 104 ntBASIC6.9□□□□□ -1.3
RNF43Q68DV7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
RNF43Q68DV7 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.9□□□□□ -1.3
RNF43Q68DV7 RN7SL270P-201ENST00000579643 281 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms