Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 RPSAP35-201ENST00000413753 818 ntBASIC4.3□□□□□ -1.72
USF2Q15853 OR6E1P-201ENST00000414424 923 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AL035660.1-201ENST00000422041 222 ntBASIC4.3□□□□□ -1.72
USF2Q15853 RIMKLBP2-201ENST00000424737 654 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 AL022331.1-201ENST00000429025 477 ntBASIC4.3□□□□□ -1.72
USF2Q15853 RPL7P56-201ENST00000429441 717 ntBASIC4.3□□□□□ -1.72
USF2Q15853 HMGB3P24-201ENST00000433260 622 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AC093716.1-201ENST00000435923 377 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AC110602.1-201ENST00000437414 318 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.3□□□□□ -1.72
USF2Q15853 AL512637.1-201ENST00000439523 1231 ntBASIC4.3□□□□□ -1.72
USF2Q15853 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 AL596266.1-201ENST00000448132 400 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 AL359839.1-201ENST00000451975 1160 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.3□□□□□ -1.72
USF2Q15853 MTCYBP14-201ENST00000457471 715 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.3□□□□□ -1.72
USF2Q15853 AC026348.1-201ENST00000462549 1053 ntBASIC4.3□□□□□ -1.72
USF2Q15853 MTND6P6-201ENST00000478031 263 ntBASIC4.3□□□□□ -1.72
USF2Q15853 RPL23AP37-201ENST00000479658 549 ntBASIC4.3□□□□□ -1.72
USF2Q15853 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
USF2Q15853 LARP7P4-201ENST00000481075 878 ntBASIC4.3□□□□□ -1.72
USF2Q15853 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.3□□□□□ -1.72
USF2Q15853 RPS3AP15-201ENST00000483874 781 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.3□□□□□ -1.72
USF2Q15853 AC060775.1-201ENST00000518241 520 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.3□□□□□ -1.72
USF2Q15853 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.3□□□□□ -1.72
USF2Q15853 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.3□□□□□ -1.72
USF2Q15853 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 AC015802.2-201ENST00000589690 189 ntBASIC4.3□□□□□ -1.72
USF2Q15853 OR7M1P-201ENST00000608946 533 ntBASIC4.3□□□□□ -1.72
USF2Q15853 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 AC145207.9-201ENST00000623802 325 ntBASIC4.3□□□□□ -1.72
USF2Q15853 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USF2Q15853 Z73965.1-201ENST00000623412 2297 ntBASIC4.3□□□□□ -1.72
USF2Q15853 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
USF2Q15853 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.3□□□□□ -1.72
USF2Q15853 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
USF2Q15853 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
USF2Q15853 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.3□□□□□ -1.72
USF2Q15853 AL359715.3-201ENST00000569267 2123 ntBASIC4.3□□□□□ -1.72
USF2Q15853 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USF2Q15853 OR51C1P-202ENST00000641159 1444 ntBASIC4.29□□□□□ -1.72
USF2Q15853 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
USF2Q15853 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
USF2Q15853 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
USF2Q15853 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USF2Q15853 AC092435.4-201ENST00000623012 4159 ntBASIC4.29□□□□□ -1.72
USF2Q15853 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.29□□□□□ -1.72
USF2Q15853 NEPNP-201ENST00000404786 1371 ntBASIC4.29□□□□□ -1.72
USF2Q15853 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.29□□□□□ -1.72
USF2Q15853 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
USF2Q15853 TLK1P1-201ENST00000456760 2440 ntBASIC4.29□□□□□ -1.72
USF2Q15853 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USF2Q15853 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USF2Q15853 SNORD56.6-201ENST00000384569 71 ntBASIC4.29□□□□□ -1.72
USF2Q15853 MIR708-201ENST00000390708 88 ntBASIC4.29□□□□□ -1.72
USF2Q15853 OR7E101P-201ENST00000400428 513 ntBASIC4.29□□□□□ -1.72
USF2Q15853 AL009179.1-201ENST00000406085 265 ntBASIC4.29□□□□□ -1.72
USF2Q15853 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.29□□□□□ -1.72
USF2Q15853 OR6K4P-201ENST00000423179 955 ntBASIC4.29□□□□□ -1.72
USF2Q15853 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.29□□□□□ -1.72
USF2Q15853 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
USF2Q15853 AC127526.2-201ENST00000426436 775 ntBASIC4.29□□□□□ -1.72
USF2Q15853 AC115283.1-201ENST00000427353 400 ntBASIC4.29□□□□□ -1.72
USF2Q15853 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.29□□□□□ -1.72
USF2Q15853 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.29□□□□□ -1.72
USF2Q15853 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.29□□□□□ -1.72
USF2Q15853 AC006335.2-201ENST00000437993 330 ntBASIC4.29□□□□□ -1.72
USF2Q15853 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.29□□□□□ -1.72
USF2Q15853 AZGP1P2-201ENST00000454506 345 ntBASIC4.29□□□□□ -1.72
USF2Q15853 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.29□□□□□ -1.72
USF2Q15853 MRE11P1-201ENST00000464884 2127 ntBASIC4.29□□□□□ -1.72
USF2Q15853 RPS23P6-201ENST00000466136 431 ntBASIC4.29□□□□□ -1.72
USF2Q15853 RN7SL583P-201ENST00000475692 287 ntBASIC4.29□□□□□ -1.72
USF2Q15853 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.29□□□□□ -1.72
USF2Q15853 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.29□□□□□ -1.72
USF2Q15853 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.29□□□□□ -1.72
USF2Q15853 TCP11X3P-202ENST00000514289 1254 ntBASIC4.29□□□□□ -1.72
USF2Q15853 RNU4-18P-201ENST00000516751 149 ntBASIC4.29□□□□□ -1.72
USF2Q15853 SNORA70.20-201ENST00000516848 126 ntBASIC4.29□□□□□ -1.72
USF2Q15853 TRIM51DP-201ENST00000529746 596 ntBASIC4.29□□□□□ -1.72
USF2Q15853 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
USF2Q15853 AC125612.1-201ENST00000547580 377 ntBASIC4.29□□□□□ -1.72
USF2Q15853 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.29□□□□□ -1.72
USF2Q15853 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.29□□□□□ -1.72
USF2Q15853 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.29□□□□□ -1.72
USF2Q15853 DPPA2P4-201ENST00000563717 878 ntBASIC4.29□□□□□ -1.72
USF2Q15853 AC092121.1-201ENST00000569452 202 ntBASIC4.29□□□□□ -1.72
USF2Q15853 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.29□□□□□ -1.72
USF2Q15853 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.29□□□□□ -1.72
USF2Q15853 MIR4310-201ENST00000582950 57 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms