Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MTCYBP21-201ENST00000443300 1113 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.89□□□□□ -1.63
SCN1BQ07699 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AC090804.1-201ENST00000448870 490 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 XKRYP5-201ENST00000449659 483 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 AC118758.1-202ENST00000454719 225 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN1BQ07699 RN7SL346P-201ENST00000491561 294 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 RN7SL57P-201ENST00000493687 290 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 GAPDHP71-201ENST00000511530 1003 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN1BQ07699 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AC100784.1-201ENST00000522790 310 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 OR8K2P-201ENST00000524645 927 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 AC084121.1-201ENST00000533882 835 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN1BQ07699 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
SCN1BQ07699 CYCSP38-201ENST00000559840 322 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 MIR4776-2-201ENST00000580204 80 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.89□□□□□ -1.63
SCN1BQ07699 MIR7973-1-201ENST00000614683 76 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN1BQ07699 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AC116563.2-201ENST00000624751 535 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.89□□□□□ -1.63
SCN1BQ07699 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.89□□□□□ -1.63
SCN1BQ07699 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SCN1BQ07699 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.89□□□□□ -1.63
SCN1BQ07699 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
SCN1BQ07699 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SCN1BQ07699 GTF2H2B-203ENST00000508065 1432 ntBASIC4.89□□□□□ -1.63
SCN1BQ07699 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN1BQ07699 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN1BQ07699 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SCN1BQ07699 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN1BQ07699 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SCN1BQ07699 IGKV7-3-201ENST00000357453 298 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 RN7SKP224-201ENST00000364140 325 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SCN1BQ07699 HMGB1P10-201ENST00000395823 563 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 AL078599.1-201ENST00000402075 293 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AC016739.1-201ENST00000405359 345 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 AL512430.2-201ENST00000406786 339 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 MTND4P11-201ENST00000417020 1058 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AC019205.1-201ENST00000421830 730 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 NPM1P24-201ENST00000428039 894 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN1BQ07699 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN1BQ07699 PNKDP1-201ENST00000435914 430 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 CBX1P4-201ENST00000439415 457 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 YWHAZP2-201ENST00000440317 728 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN1BQ07699 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AC068228.1-201ENST00000461723 211 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AL157777.1-201ENST00000468100 304 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 AC092349.1-201ENST00000504903 310 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 AC091874.2-201ENST00000505889 720 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AC091912.1-201ENST00000511351 248 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 HSD3BP3-201ENST00000514706 994 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN1BQ07699 CDC42P3-201ENST00000518493 633 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.88□□□□□ -1.63
SCN1BQ07699 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SCN1BQ07699 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SCN1BQ07699 AC027369.5-201ENST00000533838 755 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.88□□□□□ -1.63
SCN1BQ07699 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AC002310.3-201ENST00000569728 723 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.88□□□□□ -1.63
SCN1BQ07699 RN7SL435P-201ENST00000584418 282 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN1BQ07699 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN1BQ07699 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.88□□□□□ -1.63
SCN1BQ07699 KATNBL1P5-201ENST00000605015 517 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN1BQ07699 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.88□□□□□ -1.63
SCN1BQ07699 FRG1DP-201ENST00000635586 771 ntBASIC4.88□□□□□ -1.63
SCN1BQ07699 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.88□□□□□ -1.63
SCN1BQ07699 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SCN1BQ07699 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms