Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 KRT19P6-201ENST00000510983 209 ntBASIC6.19□□□□□ -1.42
YBX1P67809 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.19□□□□□ -1.42
YBX1P67809 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.19□□□□□ -1.42
YBX1P67809 AC118273.2-201ENST00000532092 465 ntBASIC6.19□□□□□ -1.42
YBX1P67809 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.19□□□□□ -1.42
YBX1P67809 RPL3P13-201ENST00000550415 216 ntBASIC6.19□□□□□ -1.42
YBX1P67809 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6.19□□□□□ -1.42
YBX1P67809 CYP2C60P-201ENST00000566088 139 ntBASIC6.19□□□□□ -1.42
YBX1P67809 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.19□□□□□ -1.42
YBX1P67809 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC6.19□□□□□ -1.42
YBX1P67809 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.19□□□□□ -1.42
YBX1P67809 AC025449.1-201ENST00000603896 529 ntBASIC6.19□□□□□ -1.42
YBX1P67809 RNU4-89P-201ENST00000607443 133 ntBASIC6.19□□□□□ -1.42
YBX1P67809 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.19□□□□□ -1.42
YBX1P67809 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.19□□□□□ -1.42
YBX1P67809 AL121873.1-201ENST00000616013 524 ntBASIC6.19□□□□□ -1.42
YBX1P67809 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.19□□□□□ -1.42
YBX1P67809 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.19□□□□□ -1.42
YBX1P67809 MIR4278-201ENST00000636094 69 ntBASIC6.19□□□□□ -1.42
YBX1P67809 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
YBX1P67809 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.19□□□□□ -1.42
YBX1P67809 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.19□□□□□ -1.42
YBX1P67809 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
YBX1P67809 NEPNP-201ENST00000404786 1371 ntBASIC6.18□□□□□ -1.42
YBX1P67809 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
YBX1P67809 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
YBX1P67809 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
YBX1P67809 Y_RNA.11-201ENST00000362375 109 ntBASIC6.18□□□□□ -1.42
YBX1P67809 RN7SKP171-201ENST00000364417 303 ntBASIC6.18□□□□□ -1.42
YBX1P67809 YWHAZP4-201ENST00000392459 708 ntBASIC6.18□□□□□ -1.42
YBX1P67809 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 AC116036.1-201ENST00000412199 367 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AL356968.2-201ENST00000412769 1257 ntBASIC6.18□□□□□ -1.42
YBX1P67809 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 TAF13P2-201ENST00000416876 286 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC6.18□□□□□ -1.42
YBX1P67809 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.18□□□□□ -1.42
YBX1P67809 RPL21P43-201ENST00000425440 472 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.18□□□□□ -1.42
YBX1P67809 RPL34P27-201ENST00000428810 349 ntBASIC6.18□□□□□ -1.42
YBX1P67809 KCTD9P1-201ENST00000430462 1167 ntBASIC6.18□□□□□ -1.42
YBX1P67809 ARL6IP1P2-201ENST00000431356 563 ntBASIC6.18□□□□□ -1.42
YBX1P67809 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.18□□□□□ -1.42
YBX1P67809 AL592447.1-201ENST00000447592 540 ntBASIC6.18□□□□□ -1.42
YBX1P67809 RPS18P1-201ENST00000447840 458 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC6.18□□□□□ -1.42
YBX1P67809 AC093392.2-201ENST00000450682 337 ntBASIC6.18□□□□□ -1.42
YBX1P67809 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.18□□□□□ -1.42
YBX1P67809 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 HMGN1P16-201ENST00000508308 283 ntBASIC6.18□□□□□ -1.42
YBX1P67809 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 HNRNPKP5-201ENST00000515300 253 ntBASIC6.18□□□□□ -1.42
YBX1P67809 RNA5SP206-201ENST00000516703 121 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AC025881.1-201ENST00000518851 512 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AP005639.1-201ENST00000526939 192 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AP003033.2-201ENST00000528901 805 ntBASIC6.18□□□□□ -1.42
YBX1P67809 OR4A43P-201ENST00000532938 908 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC6.18□□□□□ -1.42
YBX1P67809 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
YBX1P67809 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC6.18□□□□□ -1.42
YBX1P67809 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.18□□□□□ -1.42
YBX1P67809 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 RN7SL753P-201ENST00000581238 290 ntBASIC6.18□□□□□ -1.42
YBX1P67809 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.18□□□□□ -1.42
YBX1P67809 AC119501.1-201ENST00000603646 475 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AC112230.1-201ENST00000604342 547 ntBASIC6.18□□□□□ -1.42
YBX1P67809 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.18□□□□□ -1.42
YBX1P67809 AL645933.2-201ENST00000606743 1207 ntBASIC6.18□□□□□ -1.42
YBX1P67809 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC6.18□□□□□ -1.42
YBX1P67809 AL159169.2-201ENST00000610061 1269 ntBASIC6.18□□□□□ -1.42
YBX1P67809 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.18□□□□□ -1.42
YBX1P67809 MIR6861-201ENST00000618657 64 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AC092794.2-201ENST00000620933 563 ntBASIC6.18□□□□□ -1.42
YBX1P67809 AL122023.1-201ENST00000622847 530 ntBASIC6.18□□□□□ -1.42
YBX1P67809 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.18□□□□□ -1.42
YBX1P67809 AC127502.3-201ENST00000636170 1206 ntBASIC6.18□□□□□ -1.42
YBX1P67809 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.18□□□□□ -1.42
YBX1P67809 BIN2P1-201ENST00000504996 1530 ntBASIC6.18□□□□□ -1.42
YBX1P67809 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
YBX1P67809 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.18□□□□□ -1.42
YBX1P67809 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.18□□□□□ -1.42
YBX1P67809 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
YBX1P67809 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms