Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AL451049.1-201ENST00000608672 497 ntBASIC4.77□□□□□ -1.65
RPS4XP62701 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.77□□□□□ -1.65
RPS4XP62701 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RPS4XP62701 MTCO1P7-201ENST00000419523 1542 ntBASIC4.77□□□□□ -1.65
RPS4XP62701 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RPS4XP62701 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 OR5T3-201ENST00000303059 1023 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 RNA5SP183-201ENST00000362452 119 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 RNA5SP335-201ENST00000363817 110 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
RPS4XP62701 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 AL645927.1-201ENST00000396783 406 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 RPL21P67-201ENST00000402896 478 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 OR4K12P-201ENST00000406538 961 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 AMZ2P2-201ENST00000406819 1057 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 AL358178.1-201ENST00000407698 397 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.76□□□□□ -1.65
RPS4XP62701 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.76□□□□□ -1.65
RPS4XP62701 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.76□□□□□ -1.65
RPS4XP62701 HMGB3P10-201ENST00000434734 572 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.76□□□□□ -1.65
RPS4XP62701 FAR2P1-206ENST00000449736 709 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 MYL12BP2-201ENST00000503948 512 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 RNU6-491P-201ENST00000516099 110 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.76□□□□□ -1.65
RPS4XP62701 AP006245.2-201ENST00000522004 300 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 AL359219.2-201ENST00000555184 348 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
RPS4XP62701 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.76□□□□□ -1.65
RPS4XP62701 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.76□□□□□ -1.65
RPS4XP62701 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.76□□□□□ -1.65
RPS4XP62701 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.76□□□□□ -1.65
RPS4XP62701 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.76□□□□□ -1.65
RPS4XP62701 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 AC012467.1-201ENST00000607740 256 ntBASIC4.76□□□□□ -1.65
RPS4XP62701 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.76□□□□□ -1.65
RPS4XP62701 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
RPS4XP62701 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RPS4XP62701 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RPS4XP62701 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.76□□□□□ -1.65
RPS4XP62701 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPS4XP62701 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RPS4XP62701 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPS4XP62701 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RPS4XP62701 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RPS4XP62701 ZNF733P-202ENST00000444809 1573 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.75□□□□□ -1.65
RPS4XP62701 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RPS4XP62701 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPS4XP62701 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.75□□□□□ -1.65
RPS4XP62701 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RPS4XP62701 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
RPS4XP62701 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
RPS4XP62701 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
RPS4XP62701 RNU6-1320P-201ENST00000390838 107 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 RNA5SP339-201ENST00000390987 122 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 SNORD65-201ENST00000391079 73 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 RNU6-1269P-201ENST00000391139 107 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
RPS4XP62701 PEX12P1-201ENST00000400284 1048 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.75□□□□□ -1.65
RPS4XP62701 AC114878.1-201ENST00000441166 358 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AL157884.3-201ENST00000448273 1184 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.75□□□□□ -1.65
RPS4XP62701 BX842559.2-201ENST00000451418 605 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.75□□□□□ -1.65
RPS4XP62701 AC104634.1-201ENST00000452720 462 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 RNU6-599P-201ENST00000459383 107 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 RNU6-1193P-201ENST00000459461 107 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 EIF2S2P4-201ENST00000461070 984 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 RN7SL826P-201ENST00000479724 288 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AC093270.2-201ENST00000486157 792 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 NPM1P28-201ENST00000492269 840 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AC072052.1-201ENST00000496556 306 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AC231760.1-201ENST00000498002 260 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.75□□□□□ -1.65
RPS4XP62701 AC006427.1-201ENST00000514359 712 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
RPS4XP62701 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.75□□□□□ -1.65
RPS4XP62701 AC100784.1-201ENST00000522790 310 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AC022832.1-201ENST00000530718 645 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.75□□□□□ -1.65
RPS4XP62701 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.75□□□□□ -1.65
RPS4XP62701 RBM22P1-201ENST00000578589 1214 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.75□□□□□ -1.65
RPS4XP62701 RN7SL708P-201ENST00000580952 299 ntBASIC4.75□□□□□ -1.65
RPS4XP62701 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.75□□□□□ -1.65
RPS4XP62701 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.75□□□□□ -1.65
RPS4XP62701 AC002069.2-201ENST00000603580 883 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms