Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.72□□□□□ -1.81
FOXA3P55318 GSTP1P1-201ENST00000548078 319 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXA3P55318 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXA3P55318 ATP5J2P6-201ENST00000565203 266 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXA3P55318 RBM22P1-201ENST00000578589 1214 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 RN7SL176P-201ENST00000580352 264 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXA3P55318 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC3.72□□□□□ -1.81
FOXA3P55318 AC091979.2-201ENST00000607514 214 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AP005432.2-201ENST00000608162 586 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 AC234782.5-201ENST00000617723 324 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 AC074101.1-201ENST00000637861 241 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
FOXA3P55318 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 CD86-204ENST00000469710 1604 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXA3P55318 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 AC107027.3-201ENST00000565095 3473 ntBASIC3.72□□□□□ -1.81
FOXA3P55318 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.72□□□□□ -1.81
FOXA3P55318 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
FOXA3P55318 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.71□□□□□ -1.81
FOXA3P55318 SLC9B1P1-201ENST00000331172 1337 ntBASIC3.71□□□□□ -1.81
FOXA3P55318 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
FOXA3P55318 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
FOXA3P55318 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
FOXA3P55318 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXA3P55318 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXA3P55318 PANDAR-201ENST00000629595 1506 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXA3P55318 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXA3P55318 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXA3P55318 OR52B1P-201ENST00000316506 909 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 RNU1-94P-201ENST00000362627 173 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 SNORA73.1-201ENST00000363107 205 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 RN7SKP171-201ENST00000364417 303 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXA3P55318 ADIG-201ENST00000373348 430 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXA3P55318 RNU6-729P-201ENST00000384399 107 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 AC007068.1-201ENST00000396690 844 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 LRRC37BP1-201ENST00000398851 714 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 U3.35-201ENST00000408405 208 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 MIR1275-201ENST00000408770 80 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 GLS-204ENST00000409428 816 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXA3P55318 CYCSP10-201ENST00000417973 294 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
FOXA3P55318 RPS4XP16-201ENST00000427198 791 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXA3P55318 AC092162.1-201ENST00000432828 434 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 PPIAP13-201ENST00000434706 478 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 EEF1B2P3-201ENST00000447718 678 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 AL359839.1-201ENST00000451975 1160 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXA3P55318 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXA3P55318 RN7SL443P-201ENST00000464331 290 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 RN7SL799P-201ENST00000475891 298 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 RPL23AP37-201ENST00000479658 549 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 RPS4XP18-201ENST00000495480 763 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 RN7SL558P-201ENST00000497468 299 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXA3P55318 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC3.71□□□□□ -1.82
FOXA3P55318 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXA3P55318 BLZF2P-201ENST00000553776 1130 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXA3P55318 MIR3154-201ENST00000577829 84 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXA3P55318 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXA3P55318 AC087283.1-201ENST00000604029 1074 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 AC104687.2-201ENST00000604442 342 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 IGKV2OR2-2-201ENST00000605025 300 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 WBP1LP8-201ENST00000617401 327 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXA3P55318 MIPEPP2-201ENST00000422560 1819 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 EOGT-210ENST00000615922 1931 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXA3P55318 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXA3P55318 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXA3P55318 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXA3P55318 MTND5P23-201ENST00000430812 1655 ntBASIC3.71□□□□□ -1.82
FOXA3P55318 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXA3P55318 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXA3P55318 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
FOXA3P55318 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXA3P55318 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXA3P55318 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
FOXA3P55318 VN2R3P-201ENST00000422626 1412 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 ALB-219ENST00000621085 1418 ntTSL 5 BASIC3.7□□□□□ -1.82
FOXA3P55318 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 AC093535.2-201ENST00000624769 2326 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 ARHGAP42P3-201ENST00000443989 2508 ntBASIC3.7□□□□□ -1.82
FOXA3P55318 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
FOXA3P55318 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms