Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 AC125336.1-201ENST00000508893 2827 ntBASIC5.12□□□□□ -1.59
CDH12P55289 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH12P55289 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 MT-RNR2-201ENST00000387347 1559 ntBASIC5.12□□□□□ -1.59
CDH12P55289 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDH12P55289 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH12P55289 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.12□□□□□ -1.59
CDH12P55289 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.12□□□□□ -1.59
CDH12P55289 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDH12P55289 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH12P55289 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH12P55289 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH12P55289 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH12P55289 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CDH12P55289 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CDH12P55289 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDH12P55289 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH12P55289 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CDH12P55289 AC020633.1-201ENST00000468439 2247 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH12P55289 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH12P55289 SNORA64.1-201ENST00000362600 132 ntBASIC5.11□□□□□ -1.59
CDH12P55289 RNU5B-4P-201ENST00000363508 111 ntBASIC5.11□□□□□ -1.59
CDH12P55289 RNA5SP433-201ENST00000364491 114 ntBASIC5.11□□□□□ -1.59
CDH12P55289 OR7E101P-201ENST00000400428 513 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AL009179.1-201ENST00000406085 265 ntBASIC5.11□□□□□ -1.59
CDH12P55289 RNU2-17P-201ENST00000410290 190 ntBASIC5.11□□□□□ -1.59
CDH12P55289 XKRYP4-201ENST00000414395 483 ntBASIC5.11□□□□□ -1.59
CDH12P55289 RPS26P13-201ENST00000419030 330 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC066692.1-201ENST00000421721 457 ntBASIC5.11□□□□□ -1.59
CDH12P55289 NDUFA5P10-201ENST00000432147 357 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC092447.2-201ENST00000435487 669 ntBASIC5.11□□□□□ -1.59
CDH12P55289 RPS27P5-201ENST00000444247 244 ntBASIC5.11□□□□□ -1.59
CDH12P55289 EXOSC3P1-201ENST00000448649 500 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH12P55289 XKRYP5-201ENST00000449659 483 ntBASIC5.11□□□□□ -1.59
CDH12P55289 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.11□□□□□ -1.59
CDH12P55289 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH12P55289 RN7SL170P-201ENST00000487098 295 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH12P55289 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH12P55289 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH12P55289 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH12P55289 UGT2A3P7-201ENST00000510485 734 ntBASIC5.11□□□□□ -1.59
CDH12P55289 SNORA70.11-201ENST00000515987 138 ntBASIC5.11□□□□□ -1.59
CDH12P55289 SNORA70.13-201ENST00000516116 138 ntBASIC5.11□□□□□ -1.59
CDH12P55289 RNA5SP473-201ENST00000516402 125 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC060775.1-201ENST00000518241 520 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH12P55289 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH12P55289 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH12P55289 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH12P55289 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH12P55289 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH12P55289 NMNAT1P5-201ENST00000559657 841 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH12P55289 AC092121.1-201ENST00000569452 202 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH12P55289 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH12P55289 AL022067.1-201ENST00000602426 454 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC002069.2-201ENST00000603580 883 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC108738.1-201ENST00000603703 237 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC099785.1-201ENST00000605697 437 ntBASIC5.11□□□□□ -1.59
CDH12P55289 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.11□□□□□ -1.59
CDH12P55289 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH12P55289 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH12P55289 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH12P55289 uc_338.7-201ENST00000621834 124 ntBASIC5.11□□□□□ -1.59
CDH12P55289 RPL23AP61-201ENST00000623642 466 ntBASIC5.11□□□□□ -1.59
CDH12P55289 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.11□□□□□ -1.59
CDH12P55289 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
CDH12P55289 NEPNP-201ENST00000404786 1371 ntBASIC5.11□□□□□ -1.59
CDH12P55289 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH12P55289 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH12P55289 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CDH12P55289 AC100757.1-201ENST00000616872 1835 ntBASIC5.11□□□□□ -1.59
CDH12P55289 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH12P55289 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
CDH12P55289 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH12P55289 AC003973.3-201ENST00000624863 2822 ntBASIC5.1□□□□□ -1.59
CDH12P55289 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH12P55289 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CDH12P55289 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH12P55289 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH12P55289 ZNF29P-201ENST00000225587 168 ntBASIC5.1□□□□□ -1.59
CDH12P55289 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH12P55289 U3.7-201ENST00000363668 216 ntBASIC5.1□□□□□ -1.59
CDH12P55289 RN7SKP275-201ENST00000364626 301 ntBASIC5.1□□□□□ -1.59
CDH12P55289 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH12P55289 ATF1P1-201ENST00000406040 927 ntBASIC5.1□□□□□ -1.59
CDH12P55289 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CDH12P55289 UBE2V1P9-201ENST00000414760 368 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms