Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL512310.9-201ENST00000553311 948 ntBASIC5.75□□□□□ -1.49
HMGCS2P54868 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.75□□□□□ -1.49
HMGCS2P54868 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGCS2P54868 AC098935.2-201ENST00000604222 466 ntBASIC5.75□□□□□ -1.49
HMGCS2P54868 AC019193.2-201ENST00000610012 634 ntBASIC5.75□□□□□ -1.49
HMGCS2P54868 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HMGCS2P54868 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGCS2P54868 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
HMGCS2P54868 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMGCS2P54868 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.75□□□□□ -1.49
HMGCS2P54868 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HMGCS2P54868 ECM1P2-201ENST00000503354 1577 ntBASIC5.75□□□□□ -1.49
HMGCS2P54868 AL132640.2-201ENST00000559968 1698 ntBASIC5.75□□□□□ -1.49
HMGCS2P54868 SNX18P3-202ENST00000565670 1750 ntBASIC5.75□□□□□ -1.49
HMGCS2P54868 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGCS2P54868 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HMGCS2P54868 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
HMGCS2P54868 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HMGCS2P54868 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS2P54868 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS2P54868 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS2P54868 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS2P54868 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGCS2P54868 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HMGCS2P54868 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS2P54868 RN7SKP145-201ENST00000363291 303 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 RPS3AP23-201ENST00000401762 784 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGCS2P54868 RN7SKP106-201ENST00000410832 272 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 RSU1P3-201ENST00000412878 835 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 TXNP5-201ENST00000441043 315 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGCS2P54868 AC116562.1-201ENST00000485355 781 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 RN7SKP92-201ENST00000517266 244 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 AC092709.1-201ENST00000521355 1045 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 AC136777.2-201ENST00000522979 358 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.74□□□□□ -1.49
HMGCS2P54868 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGCS2P54868 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGCS2P54868 OOSP1P2-201ENST00000579644 351 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 RN7SL690P-201ENST00000582087 240 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 AC007786.3-201ENST00000615154 596 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 AC009704.2-201ENST00000618739 483 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 AC019206.1-201ENST00000621938 425 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 AC021106.3-201ENST00000623925 531 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGCS2P54868 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGCS2P54868 GVINP1-202ENST00000531871 7271 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS2P54868 AL132656.3-201ENST00000606384 1595 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS2P54868 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
HMGCS2P54868 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGCS2P54868 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
HMGCS2P54868 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS2P54868 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS2P54868 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.74□□□□□ -1.49
HMGCS2P54868 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGCS2P54868 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS2P54868 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGCS2P54868 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS2P54868 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HMGCS2P54868 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCS2P54868 AL078595.2-201ENST00000605309 1780 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 AL450345.1-202ENST00000605741 3881 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS2P54868 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCS2P54868 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGCS2P54868 AL590240.1-201ENST00000334118 313 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGCS2P54868 OR1L6-202ENST00000373684 1044 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 AL035079.1-201ENST00000405210 287 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 HYALP1-201ENST00000417674 1279 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCS2P54868 AC026979.1-201ENST00000492525 396 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGCS2P54868 AP003080.1-202ENST00000526526 915 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGCS2P54868 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS2P54868 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS2P54868 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGCS2P54868 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGCS2P54868 MIR4284-201ENST00000578924 81 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 AC093388.1-201ENST00000609166 430 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMGCS2P54868 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGCS2P54868 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMGCS2P54868 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS2P54868 AL355488.2-201ENST00000609909 2850 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCS2P54868 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS2P54868 OR9K1P-202ENST00000641111 3217 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
HMGCS2P54868 Z95114.1-201ENST00000624264 14574 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS2P54868 AL356317.1-201ENST00000396110 1436 ntBASIC5.73□□□□□ -1.49
HMGCS2P54868 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS2P54868 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS2P54868 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms