Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RNU6-551P-201ENST00000516661 103 ntBASIC5.22□□□□□ -1.57
LIMK2P53671 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.22□□□□□ -1.57
LIMK2P53671 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.22□□□□□ -1.57
LIMK2P53671 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.22□□□□□ -1.57
LIMK2P53671 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.22□□□□□ -1.57
LIMK2P53671 AL049874.4-201ENST00000557593 255 ntBASIC5.22□□□□□ -1.57
LIMK2P53671 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK2P53671 RPL10P14-201ENST00000565265 298 ntBASIC5.22□□□□□ -1.57
LIMK2P53671 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.22□□□□□ -1.57
LIMK2P53671 MIR3691-201ENST00000578066 90 ntBASIC5.22□□□□□ -1.57
LIMK2P53671 AC087763.1-201ENST00000603391 286 ntBASIC5.22□□□□□ -1.57
LIMK2P53671 AC006363.1-201ENST00000603806 463 ntBASIC5.22□□□□□ -1.57
LIMK2P53671 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.22□□□□□ -1.57
LIMK2P53671 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK2P53671 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.22□□□□□ -1.57
LIMK2P53671 AC073869.10-201ENST00000642016 354 ntBASIC5.22□□□□□ -1.57
LIMK2P53671 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK2P53671 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.22□□□□□ -1.57
LIMK2P53671 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK2P53671 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK2P53671 MAPK10-338ENST00000641647 3362 ntBASIC5.22□□□□□ -1.57
LIMK2P53671 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK2P53671 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LIMK2P53671 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.22□□□□□ -1.57
LIMK2P53671 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK2P53671 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LIMK2P53671 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.22□□□□□ -1.57
LIMK2P53671 AC003985.2-201ENST00000562268 1669 ntBASIC5.21□□□□□ -1.57
LIMK2P53671 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LIMK2P53671 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.21□□□□□ -1.57
LIMK2P53671 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
LIMK2P53671 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.21□□□□□ -1.58
LIMK2P53671 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.21□□□□□ -1.58
LIMK2P53671 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.21□□□□□ -1.58
LIMK2P53671 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 MIR105-1-201ENST00000385222 81 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LIMK2P53671 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LIMK2P53671 DUTP5-201ENST00000406790 469 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 RN7SKP125-201ENST00000410481 302 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 AC007738.1-201ENST00000413892 348 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC5.21□□□□□ -1.58
LIMK2P53671 AC104333.2-201ENST00000422630 192 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.21□□□□□ -1.58
LIMK2P53671 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.21□□□□□ -1.58
LIMK2P53671 AC007688.1-201ENST00000475592 759 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 RPL7P6-201ENST00000480903 738 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 RPL7P40-201ENST00000481703 745 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.21□□□□□ -1.58
LIMK2P53671 RPS23P1-201ENST00000491662 432 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 AC015864.1-201ENST00000496512 544 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.21□□□□□ -1.58
LIMK2P53671 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.21□□□□□ -1.58
LIMK2P53671 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.21□□□□□ -1.58
LIMK2P53671 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.21□□□□□ -1.58
LIMK2P53671 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 TAS2R6P-201ENST00000605022 826 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 AC018695.5-201ENST00000605872 315 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.21□□□□□ -1.58
LIMK2P53671 AC009163.6-201ENST00000612367 342 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 AC108359.1-201ENST00000616451 1211 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 AP000648.2-201ENST00000624182 404 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 AC100778.3-201ENST00000580060 1750 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 OR55B1P-203ENST00000641518 2602 ntBASIC5.21□□□□□ -1.58
LIMK2P53671 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.21□□□□□ -1.58
LIMK2P53671 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LIMK2P53671 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK2P53671 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK2P53671 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.2□□□□□ -1.58
LIMK2P53671 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
LIMK2P53671 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LIMK2P53671 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK2P53671 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LIMK2P53671 MTCO1P7-201ENST00000419523 1542 ntBASIC5.2□□□□□ -1.58
LIMK2P53671 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LIMK2P53671 RNA5SP305-201ENST00000362665 119 ntBASIC5.2□□□□□ -1.58
LIMK2P53671 AL133270.1-201ENST00000402635 279 ntBASIC5.2□□□□□ -1.58
LIMK2P53671 GNG5P5-201ENST00000420444 220 ntBASIC5.2□□□□□ -1.58
LIMK2P53671 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.2□□□□□ -1.58
LIMK2P53671 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.2□□□□□ -1.58
LIMK2P53671 AC009238.2-201ENST00000431026 355 ntBASIC5.2□□□□□ -1.58
LIMK2P53671 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK2P53671 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.2□□□□□ -1.58
LIMK2P53671 RPL12P3-201ENST00000440080 396 ntBASIC5.2□□□□□ -1.58
LIMK2P53671 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.2□□□□□ -1.58
LIMK2P53671 AL645937.3-201ENST00000453647 936 ntBASIC5.2□□□□□ -1.58
LIMK2P53671 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.2□□□□□ -1.58
LIMK2P53671 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.2□□□□□ -1.58
LIMK2P53671 RN7SL97P-201ENST00000486780 299 ntBASIC5.2□□□□□ -1.58
LIMK2P53671 OR52A4P-203ENST00000498233 1014 ntBASIC5.2□□□□□ -1.58
LIMK2P53671 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms