Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
NUP98P52948 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP98P52948 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP98P52948 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP98P52948 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP98P52948 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP98P52948 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP98P52948 AC020898.1-201ENST00000474167 787 ntBASIC6.02□□□□□ -1.45
NUP98P52948 AC026688.1-201ENST00000520639 1168 ntBASIC6.02□□□□□ -1.45
NUP98P52948 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP98P52948 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP98P52948 AC233699.1-201ENST00000569955 1168 ntBASIC6.02□□□□□ -1.45
NUP98P52948 AC005191.1-201ENST00000603950 358 ntBASIC6.02□□□□□ -1.45
NUP98P52948 MLECP1-201ENST00000615893 709 ntBASIC6.02□□□□□ -1.45
NUP98P52948 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP98P52948 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NUP98P52948 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP98P52948 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP98P52948 AL356317.1-201ENST00000396110 1436 ntBASIC6.02□□□□□ -1.45
NUP98P52948 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP98P52948 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
NUP98P52948 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
NUP98P52948 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
NUP98P52948 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NUP98P52948 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NUP98P52948 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
NUP98P52948 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
NUP98P52948 RPL21P108-201ENST00000413857 481 ntBASIC6.02□□□□□ -1.45
NUP98P52948 COX5BP7-201ENST00000414780 274 ntBASIC6.02□□□□□ -1.45
NUP98P52948 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP98P52948 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP98P52948 YWHAZP2-201ENST00000440317 728 ntBASIC6.02□□□□□ -1.45
NUP98P52948 AP002981.1-201ENST00000517692 975 ntBASIC6.02□□□□□ -1.45
NUP98P52948 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.02□□□□□ -1.45
NUP98P52948 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP98P52948 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.02□□□□□ -1.45
NUP98P52948 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC6.02□□□□□ -1.45
NUP98P52948 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
NUP98P52948 AC020915.5-201ENST00000596836 964 ntBASIC6.02□□□□□ -1.45
NUP98P52948 RPL12P25-202ENST00000598100 674 ntBASIC6.02□□□□□ -1.45
NUP98P52948 TEX41-238ENST00000604253 709 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP98P52948 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.02□□□□□ -1.45
NUP98P52948 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
NUP98P52948 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
NUP98P52948 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 VN1R37P-201ENST00000419096 748 ntBASIC6.01□□□□□ -1.45
NUP98P52948 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP98P52948 AL606490.8-201ENST00000441624 319 ntBASIC6.01□□□□□ -1.45
NUP98P52948 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.01□□□□□ -1.45
NUP98P52948 AC104763.1-201ENST00000475274 360 ntBASIC6.01□□□□□ -1.45
NUP98P52948 AC009643.1-201ENST00000532030 391 ntBASIC6.01□□□□□ -1.45
NUP98P52948 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.01□□□□□ -1.45
NUP98P52948 AC093249.4-201ENST00000564755 259 ntBASIC6.01□□□□□ -1.45
NUP98P52948 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
NUP98P52948 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUP98P52948 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 AC007159.1-201ENST00000566529 4706 ntBASIC6□□□□□ -1.45
NUP98P52948 CASC19-260ENST00000641828 2001 ntBASIC6□□□□□ -1.45
NUP98P52948 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6□□□□□ -1.45
NUP98P52948 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
NUP98P52948 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6□□□□□ -1.45
NUP98P52948 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 MTHFD2P5-201ENST00000320415 844 ntBASIC6□□□□□ -1.45
NUP98P52948 RNA5-8SP7-201ENST00000363443 155 ntBASIC6□□□□□ -1.45
NUP98P52948 SNORA62-201ENST00000365493 153 ntBASIC6□□□□□ -1.45
NUP98P52948 MIR129-1-201ENST00000384972 72 ntBASIC6□□□□□ -1.45
NUP98P52948 RPS16P5-201ENST00000406501 404 ntBASIC6□□□□□ -1.45
NUP98P52948 OR5M12P-201ENST00000423388 929 ntBASIC6□□□□□ -1.45
NUP98P52948 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6□□□□□ -1.45
NUP98P52948 RPS17P8-201ENST00000434525 335 ntBASIC6□□□□□ -1.45
NUP98P52948 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6□□□□□ -1.45
NUP98P52948 AL161722.1-201ENST00000446972 1032 ntBASIC6□□□□□ -1.45
NUP98P52948 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6□□□□□ -1.45
NUP98P52948 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6□□□□□ -1.45
NUP98P52948 AC083829.1-201ENST00000503756 657 ntBASIC6□□□□□ -1.45
NUP98P52948 AC007016.1-201ENST00000512110 244 ntBASIC6□□□□□ -1.45
NUP98P52948 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6□□□□□ -1.45
NUP98P52948 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6□□□□□ -1.45
NUP98P52948 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6□□□□□ -1.45
NUP98P52948 AC012414.7-202ENST00000622705 1090 ntBASIC6□□□□□ -1.45
NUP98P52948 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NUP98P52948 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6□□□□□ -1.45
NUP98P52948 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
NUP98P52948 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUP98P52948 MTCO1P15-201ENST00000529569 1526 ntBASIC6□□□□□ -1.45
NUP98P52948 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms