Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN3P51790 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCN3P51790 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN3P51790 NXF4-202ENST00000416098 1465 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN3P51790 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN3P51790 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN3P51790 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN3P51790 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN3P51790 AC083837.1-201ENST00000565297 2994 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN3P51790 ST13P16-201ENST00000401760 781 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 RNU2-72P-201ENST00000411175 163 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 SEC63P1-201ENST00000425785 1258 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.69□□□□□ -1.5
CLCN3P51790 AL161722.2-201ENST00000434731 981 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 SUMO2P1-206ENST00000445436 284 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.69□□□□□ -1.5
CLCN3P51790 RN7SL814P-201ENST00000487715 300 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 RPS12P31-201ENST00000491419 398 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.69□□□□□ -1.5
CLCN3P51790 RN7SKP260-201ENST00000516907 149 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 AC022360.1-201ENST00000521058 340 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.69□□□□□ -1.5
CLCN3P51790 EIF4A2P5-201ENST00000529914 499 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.69□□□□□ -1.5
CLCN3P51790 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.69□□□□□ -1.5
CLCN3P51790 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.69□□□□□ -1.5
CLCN3P51790 MIR4700-201ENST00000578311 74 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN3P51790 AC040174.2-201ENST00000602701 465 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 AC144521.1-201ENST00000607148 956 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 AP000240.1-201ENST00000609910 452 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 AC007786.3-201ENST00000615154 596 ntBASIC5.69□□□□□ -1.5
CLCN3P51790 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CLCN3P51790 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.69□□□□□ -1.5
CLCN3P51790 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN3P51790 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.69□□□□□ -1.5
CLCN3P51790 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN3P51790 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
CLCN3P51790 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN3P51790 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.69□□□□□ -1.5
CLCN3P51790 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.69□□□□□ -1.5
CLCN3P51790 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLCN3P51790 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.68□□□□□ -1.5
CLCN3P51790 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 AC016745.2-201ENST00000608834 3443 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCN3P51790 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCN3P51790 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CLCN3P51790 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CLCN3P51790 INTS6P1-201ENST00000504674 2530 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCN3P51790 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 RNU1-74P-201ENST00000384108 171 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 RBMY2KP-201ENST00000418221 992 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCN3P51790 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCN3P51790 Z80107.2-201ENST00000445127 392 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.68□□□□□ -1.5
CLCN3P51790 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCN3P51790 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCN3P51790 RPS24P16-201ENST00000497294 392 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCN3P51790 PCNAP1-201ENST00000505363 709 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CLCN3P51790 SETP12-201ENST00000514068 805 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC5.68□□□□□ -1.5
CLCN3P51790 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCN3P51790 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCN3P51790 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.68□□□□□ -1.5
CLCN3P51790 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCN3P51790 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCN3P51790 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.68□□□□□ -1.5
CLCN3P51790 MIR7853-201ENST00000584820 132 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 AC007423.1-201ENST00000605009 627 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 AC087783.2-201ENST00000605070 562 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 HMGB1P51-201ENST00000605166 638 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.68□□□□□ -1.5
CLCN3P51790 AP005432.2-201ENST00000608162 586 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 FAM25E-202ENST00000608562 189 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 AC100827.5-201ENST00000615883 426 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 AC074276.2-201ENST00000619891 348 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 AC091905.4-201ENST00000623432 202 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 LINC00216-201ENST00000623548 1126 ntBASIC5.68□□□□□ -1.5
CLCN3P51790 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.68□□□□□ -1.5
CLCN3P51790 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.68□□□□□ -1.5
CLCN3P51790 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLCN3P51790 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLCN3P51790 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
CLCN3P51790 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms